Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttaacacacaaaaaatttggttgtacttgtgatttcttgtttgtagaaaatggataagctttatggcggttaatttgcattgtattgttgcagAGAACAGCAGTAGTCCAGCTGCAACCACTTCTCCAACTGCAGCAGCTGATAAGCCACTGAGGCAGGAAGTGAATATATCTTGCAATAGCAACAGTGGCAA

Basic information

species Vitis vinifera
transcript Vv06s0061g00150.t01
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtttgtagaaaatggataagctttatggcggttaatttgcattgtattgttgcagAGAACAGCAGTAGTCCAGCTGCAACCACTTCTCCAACTGCAGCAGCTGATAAGCCACTGAGGCAGGAAGTGAATATATCTTGCAATAGCAACAGTGGCAA
                             ggttaat  putative branch site (score: 4)
                               ttaattt  TA-rich tract