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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttggttgatgtccattttattccttatggtaatgctatcagaaaggaaatagggattttaaccatttcttgcattatattcagGAATTAGATCGGCAAGTTCCACTGATTGATGAAATTGATACAAAG

Basic information

species Vitis vinifera
transcript Vv06s0004g03090.t01
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaatgctatcagaaaggaaatagggattttaaccatttcttgcattatattcagGAATTAGATCGGCAAGTTCCACTGATTGATGAAATTGATACAAAG
                           ttttaac  putative branch site (score: 2)
                                            attatattca  TA-rich tract