1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtattgttttggatgccactttgctggtggatcttctgtttttgacacccctttttggtttccatcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
species | Vitis vinifera |
transcript | Vv05s0062g00220.t01 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAA GTTGCTGTCTTTGAGGAAAATAATAA-GGGGATGCAGGAGAATGCTAEST: gi|349816841|gb|FQ399709.1|FQ399709
genomic: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAGgtattgtttt ... catcttgtagGTTGCTGTCTTTGAGGAAA-TAATAAAGGGGATGCAGGAGAATGCTA
EST: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAG GTTGCTGTCTTTGAGGAAATAAAAAAGGGGATGCAGEST: gi|110412506|gb|EC978256.1|EC978256
genomic: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAGgtattgtttt ... catcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
EST: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAG GTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAGEST: gi|110417406|gb|EC983458.1|EC983458
genomic: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAGgtattgtttt ... catcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
EST: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAG GTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAGEST: gi|349830095|gb|FQ420355.1|FQ420355
genomic: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAGgtattgtttt ... catcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
EST: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAG GTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAGEST: gi|110695067|gb|EE072660.1|EE072660
genomic: CCAACCAGCAGAACCGGTTAAACCCTGCCTTCAGACAGGGGGATATTCAGgtattgtttt ... catcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
EST: CCTGCCTTCAGACAGGGGGATATTCAG GTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
genomic: CCTGCCTTCAGACAGGGGGATATTCAGgtattgtttt ... catcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
actttgctggtggatcttctgtttttgacacccctttttggtttccatcttgtagGTTGCTGTCTTTGAGGAAATAATAAAGGGGATGCAG
ttttgac putative branch site (score: 3)
cccctttttggtttcc CT-rich tract
tgttttt TA-rich tract