Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gttgttattattttcaatgcctggagggtgagcaggctggtatctgtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT

Basic information

species Vitis vinifera
transcript Vv04s0043g00130.t01
intron # 5
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0043g00130.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GLYMA09G34550.1 (Glycine max), 3'ss of exon 5
------gttgttattattttcaatgcctggagggtgagcaggctggtatctgtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT
       || ||| |||||||  |  ||  | |||    ||  || |||    |   |    |||| |||  | | |||    ||           |||  ||||||| |||| |||||||||||||||| ||||||||||||||| |||||||| ||  | ||||| |||||||| ||||| || || |||||||||||||||||
gtgaagatttttaatattttc--tttcttaaaggttcttaga-tgatatagtcattatcattttcattttggtaccataacctataa---------aatcatgtagGTTCACCATTTCCTCCCAACTTTAAGGAAGTTGTGAAGACAATATTCAAGCGGTTGTTCCGTGTATATGCTCACATATACCATTCTCACTTTCAGAAAAT

upper sequence: Vv04s0043g00130.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: GLYMA01G35130.2 (Glycine max), 3'ss of exon 5
-----gttgttattattttcaatgcctggagggtgagcaggctggtatctgtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT
     | | ||| |||||||  |  ||  | | |    ||  || |||    | | |    |||| |||  | | |||    ||           |||  ||||||| |||| |||||||||||||||| ||||||||||||||| |||||||| ||  | ||||| |||||||| ||||| || || |||||||||||||||||
gtaaagattttaatattttc--tttcttaaagattcttaga-tgatatggtcatcatcattttcattttggtaccataacctataa---------aatcatgtagGTTCACCATTTCCTCCCAACTTTAAGGAAGTTGTGAAGACAATATTCAAGCGGTTGTTCCGTGTATATGCTCACATATACCATTCTCACTTTCAGAAAAT

upper sequence: Vv04s0043g00130.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: EFJ17641 (Selaginella moellendorffii), 3'ss of exon 5
gttgttattattttcaatgcctggagggtgagcaggctggtatctgtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT
                               | | |   || |  ||   |             || |  | || |  ||       ||   || || ||| ||||| |||||||||||||| | ||| ||||| ||||| || |||||| |  ||||||||||||| |||||||| || ||||| || || ||||| ||
-------------------------------gtacgtctgt-ttggtgattgggagaaagtggcatctaaaaaccttgtc-------ttctcttctgcagGCGCACCGTTTCCTCCCAACTTCAAGGAGGTTGTAAAGACCATTTTCAAAAGATTATTCCGGGTATACGCCCACATATACCACTCGCATTTCCAGAAGAT

upper sequence: Vv04s0043g00130.t01 (Vitis vinifera), 3'ss of exon 5
lower sequence: EFJ29107 (Selaginella moellendorffii), 3'ss of exon 5
gttgttattattttcaatgcctggagggtgagcaggctggtatctgtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT
                                       |||  | | | ||     |      |       |  | |     |   ||   || || ||| ||||| |||||||||||||| | ||| ||||| ||||| || |||||| |  ||||||||||||| |||||||| || ||||| || || ||||| ||
---------------------------------------gtacgtct-gtttggtgattgggagaaagtggcatctaaagacttgtcttatcttctgcagGCGCACCGTTTCCTCCCAACTTCAAGGAGGTTGTAAAGACCATTTTCAAAAGATTATTCCGGGTATACGCCCACATATACCACTCGCATTTCCAGAAGAT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|26262710|gb|CA813773.1|CA813773
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         CTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351021913|gb|FQ437700.1|FQ437700
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110689839|gb|EE066413.1|EE066413
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349822184|gb|FQ412448.1|FQ412448
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|33404660|gb|CF210287.1|CF210287
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349819713|gb|FQ402650.1|FQ402650
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349822835|gb|FQ398222.1|FQ398222
EST:     TTGGATTGAAGCTCAGCTTGATGATGAGTCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|34364008|gb|CF405593.1|CF405593
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCCCCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|33404574|gb|CF210201.1|CF210201
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110376944|gb|EC942013.1|EC942013
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351031357|gb|FQ445382.1|FQ445382
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351036314|gb|FQ458689.1|FQ458689
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351022375|gb|FQ445150.1|FQ445150
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|34319589|gb|CF372343.1|CF372343
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351052174|gb|FQ450744.1|FQ450744
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|26261758|gb|CA812821.1|CA812821
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349825682|gb|FQ421781.1|FQ421781
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349820960|gb|FQ408668.1|FQ408668
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351036564|gb|FQ457277.1|FQ457277
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110398912|gb|EC965392.1|EC965392
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|30136346|gb|CB921684.1|CB921684
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110413172|gb|EC978949.1|EC978949
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110706314|gb|EE081732.1|EE081732
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349807877|gb|FQ402268.1|FQ402268
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110386324|gb|EC950910.1|EC950910
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|56408079|gb|CX016331.1|CX016331
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351052390|gb|FQ452423.1|FQ452423
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351056071|gb|FQ453532.1|FQ453532
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|349820883|gb|FQ408591.1|FQ408591
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|56409176|gb|CX017428.1|CX017428
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110394536|gb|EC959660.1|EC959660
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|351049525|gb|FQ429147.1|FQ429147
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
EST: gi|110365808|gb|EC929275.1|EC929275
EST:     TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTG                         GTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC
genomic: TTGGATTGAAGCTCAGCTTGATGATGAATCCATATTTCCTCAGAAGCTTGgtaatatctg ... aattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT
                                         ttttaat  putative branch site (score: 3)
                                      tacttttaattttgta  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gttgttattattttcaatgcctggagggtgagcaggctggtatctgtagctttcccttcactttatttctatacttcatcggctacttttaattttgtagGTGCACCTTTTCCTCCCAACTTTAGGGAAGTTGTGAAGACGATATTCAAACGTCTATTCCGGGTATATGCCCACATTTATCACTCTCACTTTCAGAAAAT

- - - - - - - caatgcc
- - - - - - - - - - - -gagggtg
- - - - - - - - - - - - - - - -gcaggct