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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgattcttggccttgcttataacattttctgaattaagatagtcttatcaatgaactcatgtaaaaatgttgatggtgtgatttttgcagGTGCAATTTGCAGCAGGAAGAGATCTGAGACCTGGAACACTTGTGAGTCTGATACAGACTCTTACAAATTG

Basic information

species Vitis vinifera
transcript Vv02s0234g00120.t01
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aagatagtcttatcaatgaactcatgtaaaaatgttgatggtgtgatttttgcagGTGCAATTTGCAGCAGGAAGAGATCTGAGACCTGGAACACTTGTGAGTCTGATACAGACTCTTACAAATTG
                                tgttgat  putative branch site (score: 4)
                                              tttttgc  putative PPT
                       atgtaaaaat  TA-rich tract