Skip to another splice site:
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 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT

Basic information

species Vitis vinifera
transcript Vv18s0072g00340.t01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: LOC_Os11g06750.1 (Oryza sativa), 3'ss of exon 4
-----ttatttgacgct-tgtcaatacttcaaaatttagttccagctctcatatcccctaaatgat--ccttatcctctaactaatttctctggtcatg--------------gtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     | |  |   | | | | | ||  |   | |||    ||  || |    |    |  ||| |  || | | || ||| |  ||| |    ||                 ||| |  |||||||||| |||||||| |||||||||||||| || ||| | |||||||||||| |||||||||| ||||||||  | || ||||| ||||  ||    |
gtcagtaacctactgttattttactatcttgtattttgagcccttctattcagttaattggatggtaaccatgtgctgtaaattgtttgttcattctcattctaaatctttatgtgcttcagATTAGGAAAATGAAGGGCTTGAAGCAGAAGAAGGCTCACCTCATGGAGATCCAGATCAATGGTGGTACCATTGCCGATAAGGTGGACTATGGATACAAGT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: LOC_Os12g07010.1 (Oryza sativa), 3'ss of exon 4
ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     ||| | ||| || | | ||          |    ||||  |     || ||   |  | ||  | |    |   | ||| ||||   |     |||| || ||||||||||| |||||||||||||| || ||| | |||||||||||| |||| ||||| || || ||  | || ||||| ||||  ||    |
----gtga-gattgccattgcctc----------ttgtactcttctgaattctgaagagttatcatgttttgctgaccatttcttgtcaaaattc---agATCAGAAAGATGAAGGGCTTGAAGCAGAAGAAGGCTCACCTCATGGAGATCCAGATCAACGGTGGCACTATCGCCGACAAGGTGGACTATGGCTACAAGT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G109677_T04 (Zea mays), 3'ss of exon 5
ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatcct-tatcctctaactaatttctctggtcatggtgt--tatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     ||| |     | ||  |||| |   | |    ||   | || |   || |   |     |||   | |||| |  |||   ||  | || |  | |||||||||||||||||||| |||||||||||||| || ||| |||||||||| |||||||||||||| ||||||||| | || ||||| ||||  ||    |
--gagtgaagtacacctatctttcatataattgaaa-agtgattattttttctgaggcactaggtattagcaaactcacctcttatgtatttgtatcttttagATTAGGAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTGATGGAGATTCAGGTCAATGGTGGTACCATTGCTGACAAGGTGGACTATGGCTACAAAT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G324314_T05 (Zea mays), 3'ss of exon 4
ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatcct-tatcctctaactaatttctctggtcatggtgt--tatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     ||| |     | ||  |||| |   | |    ||   | || |   || |   |     |||   | |||| |  | |   ||  | || |  | |||||||||||||||||||| |||||||||||||| || ||| |||||||||| |||||||||||||| ||||||||| | || ||||| ||||  ||    |
--gagtgaagtacacctatctttcatataattgaaa-agtgattattttttctgaggcactaggtattagcaaactcaccttttatgtatttgtatattttagATTAGGAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTGATGGAGATTCAGGTCAATGGTGGTACCATTGCTGACAAGGTGGACTATGGCTACAAAT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM5G801409_T04 (Zea mays), 3'ss of exon 3
ttatttgacgcttgtcaatacttcaaaatttagttcca--gctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgt--tatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
    |  |  |  || |      |      || ||  |  |   | || |  |  |     |   |||   | |||| |  |||   ||  | || |  | |||||||||||||||||||| |||||||||||||| || ||| |||||||||| |||||||||||||| ||||||||| | || ||||| ||||  ||    |
----tcaattccagtgatccaaacggggcgtaattgaaaagtgattatttttctgaggcactaggtattagcaaactcacctcttatgtatttgtatcttttagATTAGGAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTGATGGAGATTCAGGTCAATGGTGGTACCATTGCTGACAAGGTGGACTATGGCTACAAAT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G135727_T03 (Zea mays), 3'ss of exon 4
-----ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
      ||       |||    ||| || |||||| | ||     ||| |    | |||  |  |    | |    | ||   || | |  |  |  | || |||||||||||||||||||| |||||||||||||| || ||| |||||||||| |||||||||||||| ||||||||| | || ||||| || |  |||   |
gggaagtaggcctatctttcatataattgaaaattgatttttttttctgagg--cactaggtattagccaactctcacct--cttgtgtatttctt-tcttttagATTAGGAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTGATGGAGATTCAGGTCAATGGTGGTACCATTGCTGACAAGGTGGACTACGGCTATAAAT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G132968_T02 (Zea mays), 3'ss of exon 4
----ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     ||  |    |||    ||| || |||||| | ||     | ||  |  | |||  |  |    | |    | ||   || | |  |  |  | || |||||||||||||||||||| ||||| |||||||| || ||| |||||||||| |||||||||||||| ||||||||| | || ||||| || |  ||    |
ggaagtaggtctatctttcatataattgaaaattga-ttatttttttctgaggcactaggtattagccaactctcacct--cttgtgtatttgtt-tcttttagATTAGGAAGATGAAGGGTTTGAAACAGAAGAAGGCTCACCTGATGGAGATTCAGGTCAATGGTGGTACCATTGCTGACAAGGTGGACTACGGCTACAAAT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G361049_T01 (Zea mays), 3'ss of exon 10
-----------ttatttg-acgcttgtcaatactt---caaaatttagttccagctctcat------atcccctaaatgatccttatcctctaactaatttctctggtcatggtgttat---agATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
           ||||  |     ||| | | |||      |  |||   |  |  | ||||      |     ||  |     || | || |    |  | || |  || |  | | ||   ||||||| ||||||||||| |||||||||||||| || ||| | ||||||||||||||||| ||||| || || ||  | || ||||| |||| |||    |
gtatgcttcagttatccgtgttattgcccacactcaggtgaggtttgaatttacttgtcattgtacgacagtttagttataaattgtgctatgctcacatgctatattctttatctgatttcagATTAGAAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTCATGGAGATCCAGGTCAACGGTGGCACTATAGCAGACAAGGTGGACTATGGTTACAAGT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G101675_T01 (Zea mays), 3'ss of exon 1
ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     ||| | |||    |||||   | | ||    ||| |    |||    |     || || |    |||  |  ||| |||| |        |  ||||||| ||||||||||| |||||||||||||| || ||| | ||||||||||||||||| ||||| || || ||  | || ||||| |||| |||    |
----gtgaggtttgaatttacttgtcattgta-cgacagtttagttataaattgtgctatgctcacatgctatattctttatctgat--------ttcagATTAGAAAGATGAAGGGTTTGAAGCAGAAGAAGGCTCACCTCATGGAGATCCAGGTCAACGGTGGCACTATAGCAGACAAGGTGGACTATGGTTACAAGT

upper sequence: Vv18s0072g00340.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA20G30810.1 (Glycine max), 3'ss of exon 4
----ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
     |||||   | |||||||   ||| ||||| ||   |    |   |||| | | | | |    ||| | |||| ||   | |||||      | ||| |||| ||||| ||||| || ||||||||||||||||| ||  | ||||| || ||||| |||||||| || ||||| ||||| ||||| | ||| ||  |||
ccttctattttgtgtttgtcaaa--ttccaaattcagagtccttccagttatcacatgatttagatatattc-ctaa-tagcctgtctggcttaaatcttacagATCAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCCCATATCATGGAAATTCAGGTTAATGGTGGTACTATTGCACAGAAGGTGGACTTTGCATACAGTT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110689732|gb|EE066215.1|EE066215
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|34544403|gb|CF512635.1|CF512635
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349808701|gb|FQ406442.1|FQ406442
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110724158|gb|EE099751.1|EE099751
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCANAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161713530|gb|FC064065.1|FC064065
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71866368|gb|DT015423.1|DT015423
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349816394|gb|FQ403769.1|FQ403769
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71861520|gb|DT010575.1|DT010575
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGAT
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGAT
EST: gi|161713678|gb|FC062818.1|FC062818
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|351027003|gb|FQ439863.1|FQ439863
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|351019761|gb|FQ439578.1|FQ439578
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349816421|gb|FQ403796.1|FQ403796
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|351054391|gb|FQ450474.1|FQ450474
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349820633|gb|FQ408462.1|FQ408462
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCCCACTCCG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGAAGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110421655|gb|EC987955.1|EC987955
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|33401635|gb|CF207262.1|CF207262
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349815187|gb|FQ400342.1|FQ400342
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71871964|gb|DT021019.1|DT021019
EST:     GCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: GCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161720179|gb|FC066762.1|FC066762
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71857178|gb|DT006233.1|DT006233
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTGGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTG
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTG
EST: gi|110369977|gb|EC934151.1|EC934151
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110363881|gb|EC927510.1|EC927510
EST:     AAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71863182|gb|DT012237.1|DT012237
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110364936|gb|EC928554.1|EC928554
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110703573|gb|EE080535.1|EE080535
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGATAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349814772|gb|FQ409995.1|FQ409995
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349810453|gb|FQ401899.1|FQ401899
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|351040455|gb|FQ434588.1|FQ434588
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|37189766|gb|CF609115.1|CF609115
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110696314|gb|EE075067.1|EE075067
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161714223|gb|FC064138.1|FC064138
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110723960|gb|EE099371.1|EE099371
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTANGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349811661|gb|FQ409658.1|FQ409658
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349825777|gb|FQ421876.1|FQ421876
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71872704|gb|DT021759.1|DT021759
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161720318|gb|FC071171.1|FC071171
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349821126|gb|FQ408713.1|FQ408713
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGAAGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|27584369|gb|CB007064.1|CB007064
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110689296|gb|EE065394.1|EE065394
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|156735646|gb|EV239767.1|EV239767
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71858386|gb|DT007441.1|DT007441
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGAT
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGAT
EST: gi|30251603|gb|CB969336.1|CB969336
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGACGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|30251566|gb|CB969299.1|CB969299
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGACGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110689958|gb|EE066637.1|EE066637
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTANGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71874098|gb|DT023153.1|DT023153
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71857285|gb|DT006340.1|DT006340
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAA
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAA
EST: gi|349807527|gb|FQ401942.1|FQ401942
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|33401621|gb|CF207248.1|CF207248
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110685399|gb|EE062095.1|EE062095
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|30300056|gb|CB976850.1|CB976850
EST:     ATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAT                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: ATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71860368|gb|DT009423.1|DT009423
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|351054990|gb|FQ440329.1|FQ440329
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|30128485|gb|CB913824.1|CB913824
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349823297|gb|FQ400276.1|FQ400276
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTCGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349816778|gb|FQ399646.1|FQ399646
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|110703349|gb|EE080115.1|EE080115
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161712586|gb|FC062188.1|FC062188
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCATAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|34549858|gb|CF518090.1|CF518090
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71865250|gb|DT014305.1|DT014305
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161717004|gb|FC064668.1|FC064668
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161721156|gb|FC070392.1|FC070392
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|30130215|gb|CB915554.1|CB915554
EST:     AGAANATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAG
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAG
EST: gi|351032116|gb|FQ460373.1|FQ460373
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGTACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|71863735|gb|DT012790.1|DT012790
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATG
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATG
EST: gi|71865086|gb|DT014141.1|DT014141
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349811855|gb|FQ410652.1|FQ410652
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|349819812|gb|FQ404558.1|FQ404558
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161712761|gb|FC061985.1|FC061985
EST:     AGAAAATGAAAAAATATGCT-CTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161717780|gb|FC064729.1|FC064729
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
EST: gi|161715254|gb|FC064872.1|FC064872
EST:     AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAG                         ATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC
genomic: AGAAAATGAAAAAATATGCTTCTGTCATTCGGGTTTTGGCTCACACTCAGgtactgatag ... ggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT
                          aactaat  putative branch site (score: 2)
                         taactaattt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ttatttgacgcttgtcaatacttcaaaatttagttccagctctcatatcccctaaatgatccttatcctctaactaatttctctggtcatggtgttatagATTAGGAAGATGAAGGGATTGAAGCAGAAGAAAGCACACTTGATGGAGATCCAGGTCAATGGTGGAACCATTGCTCAGAAAGTGGATTATGCTTATGGTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- - - - -gcttgtc
- - - - - - - - - - - tcaaaat
- - - - - - - - - - - - - - - - - - -agctctc
- - - - - - - - - - - - - - - - - - - - - - - -tccccta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aactaat