1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgaattatcctttttcactgttatatttattgggcaaatagactttcctctatactactgcatatgtccagtcttggagattggaatcagtcctcataagtgcggtttaatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTGATTTTCGGGTTGGCTCTGGGATACAAGTCTGTCATCATTCCAATATTT
species | Vitis vinifera |
transcript | Vv14s0060g01280.t01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|352765297|gb|FQ465994.1|FQ465994
genomic: ATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|30303742|gb|CB980536.1|CB980536
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|71865313|gb|DT014368.1|DT014368
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|30299286|gb|CB976080.1|CB976080
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|71861591|gb|DT010646.1|DT010646
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|110723031|gb|EE099877.1|EE099877
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTEST: gi|161713995|gb|FC063180.1|FC063180
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
EST: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAG TCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
genomic: GGACTTGTTATTGGATATATTACTGAGTATTACACTAGCAATGCTTACAGgtgaattatc ... aatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGT
atgtccagtcttggagattggaatcagtcctcataagtgcggtttaatgtttcagTCCAGTGCAGGATGTGGCTGATTCTTGCAGGACTGGTGCTGCAACAAATGTGATTTTCGGGTTGGCTCTGGGATACAAGTCTGTCATCATTCCAATATTT
gtttaat putative branch site (score: 4)
tttaatgttt TA-rich tract