Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   
3  
 5'  3'   
4  
 5'  3'   
5  
 5'  3'   
6  
 5'  3'   
7  
 5'  3'   
8  
 5'  3'   
9  
 5'  3'   
10  
 5'  3'   
11  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaatttttttcaagtattggtacaatgatgattttatagctcttctttctccgtccactaactggtaaatatattttttgttcttagGTTGAGAAGTGGATGGAGAAATTGGAGGAAACTGAAACTAAGCGGAGACTCACGATCAAAACAAGCATTGTTACAGTTACCGTATTT

Basic information

species Vitis vinifera
transcript Vv10s0003g02830.t01
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttatagctcttctttctccgtccactaactggtaaatatattttttgttcttagGTTGAGAAGTGGATGGAGAAATTGGAGGAAACTGAAACTAAGCGGAGACTCACGATCAAAACAAGCATTGTTACAGTTACCGTATTT
                       cactaac  putative branch site (score: 1)
 tattttttgttctt  putative PPT
 taaatatattttttgt  TA-rich tract