1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
gtagtcgtaatcttcaatttcttaaacatgaatcttaaaaatggaatgggcttttcttcttttctgattttgtatgtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCCAACACAGAGCGATACAGTAATTTGATTGTGGGACTGAATGACACCATA
species | Vitis vinifera |
transcript | Vv07s0031g00920.t01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110371149|gb|EC934944.1|EC934944
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110729372|gb|EE105268.1|EE105268
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|18458132|gb|BM436410.1|BM436410
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110713164|gb|EE088844.1|EE088844
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCCGTGGACTGCEST: gi|30296451|gb|CB973245.1|CB973245
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|30298421|gb|CB975215.1|CB975215
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGGGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|33405434|gb|CF211061.1|CF211061
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|351016826|gb|FQ424253.1|FQ424253
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|294966526|gb|GW837661.1|GW837661
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTATGGACTGCEST: gi|110733015|gb|EE108807.1|EE108807
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110712332|gb|EE089829.1|EE089829
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110686165|gb|EE063519.1|EE063519
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: GCACCTAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110370782|gb|EC932929.1|EC932929
genomic: GCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|351028589|gb|FQ446262.1|FQ446262
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110699399|gb|EE076363.1|EE076363
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAN GGAGTTTAAGGGAGGCA-CCAAGGTGGATAAGGTGGGTGGTGCTGTGGACTEST: gi|352781953|gb|FQ469251.1|FQ469251
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGG-AGGCAACCAAGGTGGATAAGGTGG-TGGTGCTGTGGACT
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCCAGGTGGATAAAGTGGEST: gi|349823419|gb|FQ423230.1|FQ423230
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGG
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|18458598|gb|BM436876.1|BM436876
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|156736210|gb|EV240331.1|EV240331
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|18459446|gb|BM437724.1|BM437724
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110711003|gb|EE087708.1|EE087708
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|351029253|gb|FQ435453.1|FQ435453
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|30254160|gb|CB971175.1|CB971175
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110710113|gb|EE086162.1|EE086162
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAAGTCCAGCAGATCATTAAAGATATTAG GGGAGTTTAAAGAAGCAACCAAEST: gi|110697958|gb|EE075424.1|EE075424
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGG-AGTTTAAGGAGGCAACCAA
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCTTCCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|18459629|gb|BM437907.1|BM437907
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|349830747|gb|FQ417045.1|FQ417045
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: AACAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGTCA-CCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGEST: gi|29786214|gb|CB343821.2|CB343821
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGG-CAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTG
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110728696|gb|EE104489.1|EE104489
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110698948|gb|EE077030.1|EE077030
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110699779|gb|EE077086.1|EE077086
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGAATAAGGTGGGGGTGCTGGGGACTGEST: gi|110707916|gb|EE084861.1|EE084861
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGA-TAAGGTGGTGGTGCTGTGGACTG
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|30296613|gb|CB973407.1|CB973407
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|110698025|gb|EE075563.1|EE075563
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTANAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|34547806|gb|CF516038.1|CF516038
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCEST: gi|18459650|gb|BM437928.1|BM437928
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
EST: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAG GGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
genomic: ATCAAAGGCACCAAGAAAGAGCAGGTCCAGCAGATCATTAAAGATATTAGgtagtcgtaa ... gtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGC
aatcttaaaaatggaatgggcttttcttcttttctgattttgtatgtatgattagGGAGTTTAAGGAGGCAACCAAGGTGGATAAGGTGGTGGTGCTGTGGACTGCCAACACAGAGCGATACAGTAATTTGATTGTGGGACTGAATGACACCATA
ttctgat putative branch site (score: 3)
attttgtat TA-rich tract