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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtttgaatattcaaattaaaaccaccttaccttcaaagatttcatttgtgctctgacattaattcttggtacctatttttataacagCATAATTGCAGCAGTGTTGATCATAGTGGGCTTGTATATTGTTTTATAG

Basic information

species Vitis vinifera
transcript Vv04s0044g00350.t01
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcaaagatttcatttgtgctctgacattaattcttggtacctatttttataacagCATAATTGCAGCAGTGTTGATCATAGTGGGCTTGTATATTGTTTTATAG
                        cattaat  putative branch site (score: 3)
                                       cctattttt  putative PPT
                                     tacctatttttataa  TA-rich tract