Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttctctctctctctctctctctctttctctctctgaaggtggcggactattttatgttgcctgtgggttatttttctgatgaatggtgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTCCCTATTCCTTCTACTATTTGCCATGGCAAGCGTGAGAAG

Basic information

species Vitis vinifera
transcript Vv04s0044g00020.t01
intron # 4
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|30135886|gb|CB921224.1|CB921224
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|219555270|gb|FG984971.1|FG984971
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTAATAAAATTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|349812620|gb|FQ409779.1|FQ409779
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|56408561|gb|CX016813.1|CX016813
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110419962|gb|EC986222.1|EC986222
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110708079|gb|EE085208.1|EE085208
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAA                         GTCGACTACTTCCCCTTCA-GGTTTTGATCCTGTTCGTCATGCCGAAACAT
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCC-TTCAAGGTTT-GATCCTGTTCGTCATGCGGAGACAT
EST: gi|225387950|gb|GO307581.1|GO307581
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|37188826|gb|CF608175.1|CF608175
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCG
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCG
EST: gi|352778187|gb|FQ468849.1|FQ468849
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30137942|gb|CB923280.1|CB923280
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAG
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAG
EST: gi|349807349|gb|FQ401341.1|FQ401341
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110410809|gb|EC976503.1|EC976503
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|351056280|gb|FQ453742.1|FQ453742
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAAACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|37186111|gb|CF605464.1|CF605464
EST:     ATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|349807347|gb|FQ401339.1|FQ401339
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110374143|gb|EC938711.1|EC938711
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30137522|gb|CB922860.1|CB922860
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTNCCCTTCA-GGTTTGATCCTGTTCGTCATGCGGAGACATT
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTT-CCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATT
EST: gi|22012218|gb|BQ797252.1|BQ797252
EST:     TTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: TTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|27586466|gb|CB009161.1|CB009161
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110366467|gb|EC930373.1|EC930373
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110424818|gb|EC991191.1|EC991191
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|349823310|gb|FQ402509.1|FQ402509
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110361601|gb|EC925087.1|EC925087
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|161715587|gb|FC067765.1|FC067765
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTT
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTT
EST: gi|28959361|gb|CB339681.1|CB339681
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|34546991|gb|CF515223.1|CF515223
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTG-ATCGATTTGATCCTGTTCGTCATGCGGAGACA
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGG-TTTGATCCTGTTCGTCATGCGGAGACA
EST: gi|351029844|gb|FQ427684.1|FQ427684
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30256306|gb|CB972149.1|CB972149
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|34547365|gb|CF515597.1|CF515597
EST:     ACAACAATCACCGTGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30137256|gb|CB922594.1|CB922594
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|22013234|gb|BQ798268.1|BQ798268
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|161717022|gb|FC068454.1|FC068454
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|351028597|gb|FQ446270.1|FQ446270
EST:     ACAACAATCACCATGACGGTTCCGTGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|18458026|gb|BM436304.1|BM436304
EST:     ACAACAATCACCATGACTGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110391318|gb|EC956284.1|EC956284
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110375969|gb|EC941001.1|EC941001
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30131915|gb|CB917254.1|CB917254
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110401095|gb|EC967689.1|EC967689
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30256241|gb|CB972084.1|CB972084
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|352791475|gb|FQ481054.1|FQ481054
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAAAAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110698067|gb|EE075653.1|EE075653
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|351037522|gb|FQ460721.1|FQ460721
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|22013532|gb|BQ798566.1|BQ798566
EST:     GTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: GTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|351017250|gb|FQ435602.1|FQ435602
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110690332|gb|EE067340.1|EE067340
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30306275|gb|CB983069.1|CB983069
EST:     CAACAATCACCATGTATG-TTCCATGANTTACATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: CAACAATCACCATG-ACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|349808267|gb|FQ403454.1|FQ403454
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|71883039|gb|DT032094.1|DT032094
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|33405094|gb|CF210721.1|CF210721
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|351035575|gb|FQ463420.1|FQ463420
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|219555049|gb|FG984838.1|FG984838
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110721789|gb|EE097452.1|EE097452
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCNGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|71886524|gb|DT035579.1|DT035579
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|27585185|gb|CB007880.1|CB007880
EST:     ATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110701023|gb|EE078191.1|EE078191
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110409980|gb|EC975655.1|EC975655
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|110701025|gb|EE078193.1|EE078193
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|27579399|gb|CB002094.1|CB002094
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
EST: gi|30135018|gb|CB920356.1|CB920356
EST:     ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAG                         GTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC
genomic: ACAACAATCACCATGACGGTTCCATGAATTTCATGCACAGGGATGAGGAGgttctctctc ... tgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcggactattttatgttgcctgtgggttatttttctgatgaatggtgtttcttagGTCGACTACTTCCCTTCAAGGTTTGATCCTGTTCGTCATGCGGAGACATTCCCTATTCCTTCTACTATTTGCCATGGCAAGCGTGAGAAG
                                ttctgat  putative branch site (score: 3)
                                             tgtttctt  putative PPT
      tattttatgtt  TA-rich tract