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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT

Basic information

species Vitis vinifera
transcript Vv03s0017g01350.t01
intron # 4
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: LOC_Os03g27260.1 (Oryza sativa), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
           |    ||||  |     | | |  |||  |      |    ||||| ||  | |||  |  ||   | | |  |  ||     |  ||  ||||     |||||||||| ||||||||||||||||| || ||| |||| ||||| || |||||| | || ||||| ||||||||||||||||| ||||||||| | |||||
-----------gtagatgtttaagatgcttacatttga--atggttat--gtttcattttgctttgctggcaggtgttctaatgtgaat---gttccatttttatactgacagGTACCCCCTGCTTCCGTGGATATGGCAGGCGTGATGGTGAGCGCAGAAGGAAGTCAGTCCGTGGTTGCATTGTCAGCCAAGATCTCTCTGTTATCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: LOC_Os07g42950.1 (Oryza sativa), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttat-gcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                            ||||||     | | |    ||   | ||    ||  | |  ||    |  |     | |  | | | | |  ||| | || ||||| || || ||||||||||| ||||| || ||| |||| ||||| ||||||||| |||| ||||| ||||| |||||||| ||||| |||||| | |||||
---------------------------gtaaaaa---ggctctatttcta---ttattgactttcggatattcatgcccttgctctgaccatattatgttacttgtatg-gcagGCACACCTTGCTTCCGTGGGTATGGCAGGCGTGATGGTGAGCGCAGGAGGAAGTCTGTCCGTGGTTGCATCGTCAGCCAGGACCTATCTGTTATTAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G054136_T06 (Zea mays), 3'ss of exon 3
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttca---tattttta-tgcaagttgggtctatgagatttatt---acactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                  ||||  ||| ||       |  | |   | || || ||   || | | |   | |  |    || |||   ||||    ||| |  ||    |||   | ||| || || ||||||||||| ||||| || |||||||| ||||| ||||||||| |||| ||||| ||||| || ||||||||||| |||||| | |||||
------------------ttctgctccataggggtatag-agacttcctatgtccagtgtactctcaacaccatcttttactctgattcttatctgaacattcgatatcaattct-gtagGCACTCCCTGCTTCCGTGGTTATGGCAGGCGTAATGGTGAGCGCAGGAGGAAGTCTGTCCGTGGTTGCATCGTGAGCCAAGACCTATCTGTTATCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G054136_T01 (Zea mays), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttatt---acactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                            || | |||    |   ||    |||  |  | |  |  | |  |    || |||   ||||    ||| |  ||    |||   | ||| || || ||||||||||| ||||| || |||||||| ||||| ||||||||| |||| ||||| ||||| || ||||||||||| |||||| | |||||
-------------------------gtatagagacttcctatgtcc----agtgtac-tctcaacaccatcttttactctgattcttatctgaacattcgatatcaattct-gtagGCACTCCCTGCTTCCGTGGTTATGGCAGGCGTAATGGTGAGCGCAGGAGGAAGTCTGTCCGTGGTTGCATCGTGAGCCAAGACCTATCTGTTATCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G054136_T02 (Zea mays), 3'ss of exon 3
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                 ||    |  |||   |  |       || || |    |||  |||||  |   ||     |||  ||      ||| |  ||    |||   | ||| || || ||||||||||| ||||| || |||||||| ||||| ||||||||| |||| ||||| ||||| || ||||||||||| |||||| | |||||
-----------------gtatagagacttcctatttacagtgtactctcagcaccat-cttttactctgatt---cttatctga------acattcgatatcaattct-gtagGGACTCCCTGCTTCCGTGGTTATGGCAGGCGTAATGGTGAGCGCAGGAGGAAGTCTGTCCGTGGTTGCATCGTGAGCCAAGACCTATCTGTTATCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM5G851698_T01 (Zea mays), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT-----------------------------------------------------------------------
                                                                                   || |   ||| || ||  | | ||| | ||| || || |||||||| || ||||| || |||||||| ||||| ||||||||| |||| ||||| || ||||| ||||||||||| |||||| | |||||                                                                       
----------------------------------------------------------------------------------tatctga-acatttgata-tgaattgtgtaggcactccctgcttccgcggttatggcaggcgtaatggtgagcgcaggaggaagtctgtccgtggttgtattGTGAGCCAAGACCTATCTGTTATCAACTTGGTAATTGTTAAGAAGGGTGAGAACGATCTGCCTGGTTTAACTGACACTGAGAAGCCAAGGATGAGGGGTC

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM5G851698_T02 (Zea mays), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                   | ||     |  |     ||   | | || ||   |   | ||| | |  || |    |||  ||      ||| || ||  | | ||| | ||| || || |||||||| || ||||| || |||||||| ||||| ||||||||| |||| ||||| || ||||| ||||||||||| |||||| | |||||
------------------gtatatagactgtatctccattgta-ctctcaacaccccctcttt-tacctgtggttcttatctga------acatttgata-tgaattgtgtagGCACTCCCTGCTTCCGCGGTTATGGCAGGCGTAATGGTGAGCGCAGGAGGAAGTCTGTCCGTGGTTGTATTGTGAGCCAAGACCTATCTGTTATCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GRMZM2G040600_T01 (Zea mays), 3'ss of exon 3
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttca---tattttta-tgcaagttgggtctatgagatttatt---acactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                   |||| ||| ||       |  | |   | || || ||   || | | |   | |  |    || |||   ||||    ||| |  ||    |||   | ||| || || ||||||||||| ||||| || |||||||  ||||| ||||||||  |||| ||||| ||||| || ||||||||||| |||||| | |||||
------------------ctctactccataggggtatag-agacttcctatgtccagtgtactctcagcaccatcttttactctgattcttatctgaacattcgatatcaattct-gtagGCACTCCCTGCTTCCGTGGTTATGGCAGGCGTAATGTTGAGCGCAGGAGGAATTCTGTCCGTGGTTGCATCGTGAGCCAAGACCTATCTGTTATCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA08G45770.1 (Glycine max), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaaccctta--agttcatatttttatgcaag-ttgggtctatgagatttattacactttatgc-ttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                  |  ||||  |||| |    |   ||    ||   |  |||  | | ||       ||  |||||  |  |   || |  |||||   ||| |||| |||| || || |||||||||||||||||||| |||||||||||||| ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||
-----------------ttattaatttttaatagtgtaatgcatttgttgttatatcaggtgtctacattttcttttgtctacaaactaattttctttttatttgttacttgaacagGAACTCCTTGCTTCCGTGGATATGGAAGGCGTAATGGAGAGCGTAGGAGAAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA18G26190.1 (Glycine max), 3'ss of exon 3
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagt-tgggtctatgagatttattacactttatgc-ttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
               || |  | ||  || || | ||      |    |    |||  | | | |||     |  |||||  |  |   || |  |||||   ||| |||| |||| || || |||||||||||||||||||| ||||||||||| || ||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||
---------------ctttattcattttttaataatgtcatgcatttgttgtatcaggtgtctctgctttcctttgtctacaaactaattttctttttatttgttacttgaacagGAACTCCTTGCTTCCGTGGATATGGAAGGCGTAATGGAGAACGTAGGAGAAAGTCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA13G24630.1 (Glycine max), 3'ss of exon 4
gtgagtaaactgggactgttc-taatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
     ||  |   |||  ||     ||  || ||||  ||     |    |  |||  ||    ||||  ||| |       ||  || |||  |||| |    ||||||||||| || || || ||||||||||||||||| || ||||||||||| || |||||  |||||||||||||||||||||||| |||||||||||||||||||||
----atatgcaatgacctttagctttcactagaaacctatttatgca---agattctcatagccatgcttgtttgc------agtcttgttaatcttttt-tgcatttgagcagGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGTAGAAGGAAATCTGTTCGTGGGTGCATTGTCAGCCCAGACCTCTCTGTTTTGAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA07G31840.3 (Glycine max), 3'ss of exon 3
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
     |  | ||  |   || | | | ||||   ||    ||  |  || | | ||   || |  || |  |   | |      ||  | |   ||| |||  ||||||||||| || || || ||||||||||||||||| || ||||||||||| || |||||| |||||||||| ||||||||||| | ||| ||||||||||||||| |
-----ttta-tgcaatgatttttagctttaa---ctagaaac--cttttcattgcaggattctcagccatgtttatttgcagacttgttaatgttttttgc--atttgagcagGAACTCCTTGTTTCCGTGGATATGGAAGGCGCAATGGAGAGCGTAGAAGGAAGTCTGTTCGTGGTTGCATTGTCAGTCCAGATCTCTCTGTTTTGAACCT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA15G08210.1 (Glycine max), 3'ss of exon 4
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagattta-ttacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
          | |   |  | |  |  || | |||||  | ||      ||  |  ||     |     |||   | |   |  || | || || ||  ||||||     ||||| || || || |||||||| |||||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||| | |||||
---------tttgaggtactgtttttttttataactggactcagg----aaacttttagcca-acctttgttattttttcaatgttaaatttcatttgttgcttacccatgcagGAACTCCTTGTTTCCGTGGTTATGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCTGACCTCTCTGTTCTCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA13G31130.1 (Glycine max), 3'ss of exon 5
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
   |||||  |        | |  |  |||   |||| |           | || || || ||   | | |        | | |||| |     ||  ||||||  |||||||| || || || |||||||| || ||||| || ||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||| | |||||
---agtaaggtcatgtatatttgttttttaggtactgctttttcataaccaatttatgttattggtccaat-------gttaaatttct---gtttgttgcttacctgagcagGAACTCCTTGTTTCCGTGGTTACGGAAGGCGCAATGGAGAGCGTAGGAGGAAGTCTGTTCGTGGGTGCATTGTCAGCCCTGACCTCTCTGTTCTCAACTT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: GLYMA16G09330.1 (Glycine max), 3'ss of exon 2
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
     |  |  |    ||      || |||     |||    |  ||||  |   ||  | ||  |  |      | | | |   |  || || |    | || | | | |||| || || |||||||||||||| ||||| || || |||||||||||||||||   |||||| |||||||||||||||| ||| ||||||||| ||||| |
-----tttatggcagatgcatgtctctttatgctatgactttattccttttgaagatggtcttgagggat----atttttaattctctttgcatt----gattgtgttaacagGAACTCCTTGCTTCCGTGGATACGGAAGGCGCAACGGAGAGCGAAGGAGGAAATTTGTTCGCGGGTGCATTGTCAGCCCAGATCTCTCTGTTCTGAACCT

upper sequence: Vv03s0017g01350.t01 (Vitis vinifera), 3'ss of exon 4
lower sequence: EFJ14726 (Selaginella moellendorffii), 3'ss of exon 3
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                                                |||    ||  || | |     ||   |||      ||  ||    |||  | ||   ||| ||||   | | ||||| ||||| |||||  ||||  |||| ||||| ||||||||| | |||||||| |||||||||||||| || || |||||| | ||  |
-----------------------------------------------gtaaaacgatgcttcttttttcttt---tctccctctttcgttctgatttgagatt-cgtgaccagGCGACACTTGCTTTCGTGGGTATGGGCGACGCGATGGTGAGCGGAGGAGGAAGTCAGTTCGTGGTTGCATTGTCAGCCATGATCTGTCTGTTCTCAATCT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351041278|gb|FQ447405.1|FQ447405
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|71858575|gb|DT007630.1|DT007630
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110709928|gb|EE085815.1|EE085815
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|30254132|gb|CB971147.1|CB971147
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|30303751|gb|CB980545.1|CB980545
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110686550|gb|EE064318.1|EE064318
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAAACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|34549826|gb|CF518058.1|CF518058
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110703116|gb|EE079679.1|EE079679
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110692010|gb|EE070768.1|EE070768
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110686044|gb|EE063293.1|EE063293
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|161714863|gb|FC063014.1|FC063014
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|30303557|gb|CB980351.1|CB980351
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110690121|gb|EE066941.1|EE066941
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|77584224|gb|DV221176.1|DV221176
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110703874|gb|EE081192.1|EE081192
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGAA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110687325|gb|EE064639.1|EE064639
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|351031319|gb|FQ445344.1|FQ445344
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|33406716|gb|CF212343.1|CF212343
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|349818266|gb|FQ409041.1|FQ409041
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|71872051|gb|DT021106.1|DT021106
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110686489|gb|EE064185.1|EE064185
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|351043763|gb|FQ431315.1|FQ431315
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110705320|gb|EE082057.1|EE082057
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|77582325|gb|DV220132.1|DV220132
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110702349|gb|EE080961.1|EE080961
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|161718545|gb|FC065376.1|FC065376
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|33406814|gb|CF212441.1|CF212441
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|161710419|gb|FC061114.1|FC061114
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|294967313|gb|GW836667.1|GW836667
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110687004|gb|EE064045.1|EE064045
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|71858106|gb|DT007161.1|DT007161
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTGATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110695508|gb|EE073605.1|EE073605
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110689843|gb|EE066424.1|EE066424
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|33407688|gb|CF213315.1|CF213315
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110376798|gb|EC941874.1|EC941874
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|161709975|gb|FC058485.1|FC058485
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|349814419|gb|FQ398859.1|FQ398859
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|30296264|gb|CB973058.1|CB973058
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|34362861|gb|CF404446.1|CF404446
EST:     TAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTNCGTGGATATGAAAGACGTAAT-GAGAGCGAAGGAGGA
genomic: TAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|34543567|gb|CF511799.1|CF511799
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110387508|gb|EC952179.1|EC952179
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110686570|gb|EE064362.1|EE064362
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|71865483|gb|DT014538.1|DT014538
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|352798903|gb|FQ480752.1|FQ480752
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|351022641|gb|FQ428550.1|FQ428550
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|349818085|gb|FQ408860.1|FQ408860
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110730438|gb|EE107514.1|EE107514
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|30135834|gb|CB921172.1|CB921172
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|349812997|gb|FQ411237.1|FQ411237
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|349831058|gb|FQ420728.1|FQ420728
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110687107|gb|EE064226.1|EE064226
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|351012895|gb|FQ430458.1|FQ430458
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|352793839|gb|FQ481993.1|FQ481993
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|349823129|gb|FQ400108.1|FQ400108
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|33407408|gb|CF213035.1|CF213035
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110708752|gb|EE086649.1|EE086649
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110692741|gb|EE068362.1|EE068362
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110369059|gb|EC933202.1|EC933202
EST:     GTGTTAGTCTTTTGCTTCATAGGG                         GTCCCCCATGCTTCCGTGGATTATGGAAGACGTAATGGAGAGCGAAGGAGG
genomic: GTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGA-TATGGAAGACGTAATGGAGAGCGAAGGAGG
EST: gi|110732397|gb|EE107650.1|EE107650
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|351021777|gb|FQ437162.1|FQ437162
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110707350|gb|EE083672.1|EE083672
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110689801|gb|EE066341.1|EE066341
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|34543482|gb|CF511714.1|CF511714
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110362869|gb|EC926427.1|EC926427
EST:     GCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|110730182|gb|EE106970.1|EE106970
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGAA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
EST: gi|351046234|gb|FQ442612.1|FQ442612
EST:     GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGG                         GTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA
genomic: GAAGCAGGGAGTACTGACTCCTGGCCGTGTTAGTCTTTTGCTTCATAGGGgtgagtaaac ... atttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT
                                          cttattt  CT-rich tract
                         atttattacactttat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtgagtaaactgggactgttctaatccttaaaaactgatcacaacccttaagttcatatttttatgcaagttgggtctatgagatttattacactttatgcttatttgagcagGTACCCCATGCTTCCGTGGATATGGAAGACGTAATGGAGAGCGAAGGAGGAAGGCTGTTCGTGGGTGCATTGTCAGCCAAGACCTCTCTGTTTTGAACTT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT