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gtaagttattcattgaaccggttgatgattttaagcttagtgcaattttgaatgaccataatgtgctttagtctttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
species | Vitis vinifera |
transcript | Vv02s0025g03030.t01 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCA ACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGTEST: gi|110362211|gb|EC925728.1|EC925728
genomic: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCAgtaagttatt ... ttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
EST: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCA ACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGTEST: gi|71857563|gb|DT006618.1|DT006618
genomic: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCAgtaagttatt ... ttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
EST: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCA ACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGTEST: gi|34548802|gb|CF517034.1|CF517034
genomic: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCAgtaagttatt ... ttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
EST: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCA ACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGTEST: gi|110718208|gb|EE094777.1|EE094777
genomic: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCAgtaagttatt ... ttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
EST: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCA ACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
genomic: ATAGACACTTGGTTTCATACAAAAGGTTCAAACAAATGCGAGATATGCCAgtaagttatt ... ttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
tttaagcttagtgcaattttgaatgaccataatgtgctttagtctttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
tctttttgt CT-rich tract
aattttgaat TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtaagttattcattgaaccggttgatgattttaagcttagtgcaattttgaatgaccataatgtgctttagtctttttgtgtagACAGGTAGCCTCAAATGTGTCTCCTCCGGAATCCCAACCGAGT
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