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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgaggccttccgttaactatatacttgttttttccccatatgaatagggctgcctttgaaatccttttctatttttatctgatgttttgtttttgattgctcaatgttggttttattagGCATTTGAGAAGAAGCGCACCTCTACATGGCGTTATGACATTGGTCGAAAGAAAAACTTTGAACAGGTTACAGTTTTTTTTAACATGTTACATTATTGCC

Basic information

species Vitis vinifera
transcript Vv00s1737g00010.t01
intron # 4
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttctatttttatctgatgttttgtttttgattgctcaatgttggttttattagGCATTTGAGAAGAAGCGCACCTCTACATGGCGTTATGACATTGGTCGAAAGAAAAACTTTGAACAGGTTACAGTTTTTTTTAACATGTTACATTATTGCC
                          ttttgat  putative branch site (score: 4)
                                              ttttatt  putative PPT
     tatttttatctgat  TA-rich tract