1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
21 5' 3' | 22 5' 3' | 23 5' 3' | 24 5' 3' | 25 5' 3' | 26 5' 3' | 27 5' 3' | 28 5' 3' | 29 5' 3' | 30 5' 3' | 31 5' 3' | 32 5' 3' | 33 5' 3' | 34 5' 3' | 35 5' 3' | 36 5' 3' | 37 5' 3' | 38 5' 3' | 39 5' 3' | 40 5' 3' |
41 5' 3' | 42 5' 3' |
gtatgcatttggttgtaggtcacttgatttttccttctattttttcccctgaaatgttgaagtatttaactttctcttccatgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
species | Vitis vinifera |
transcript | Vv06s0004g01270.t01 |
intron # | 39 |
splice site | 3' |
intron type | U2 |
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719044|gb|EE096573.1|EE096573
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719280|gb|EE097073.1|EE097073
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720700|gb|EE096852.1|EE096852
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GCCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720848|gb|EE097127.1|EE097127
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720658|gb|EE096775.1|EE096775
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719534|gb|EE094756.1|EE094756
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719236|gb|EE096981.1|EE096981
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720627|gb|EE096716.1|EE096716
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAGAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110714649|gb|EE091794.1|EE091794
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719285|gb|EE097086.1|EE097086
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719070|gb|EE096623.1|EE096623
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720759|gb|EE096960.1|EE096960
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGATGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110700656|gb|EE077502.1|EE077502
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719077|gb|EE096638.1|EE096638
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|71877602|gb|DT026657.1|DT026657
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719312|gb|EE097145.1|EE097145
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110718917|gb|EE096294.1|EE096294
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719169|gb|EE096834.1|EE096834
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|71879777|gb|DT028832.1|DT028832
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|30299763|gb|CB976557.1|CB976557
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110725103|gb|EE101525.1|EE101525
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719337|gb|EE097194.1|EE097194
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110719115|gb|EE096724.1|EE096724
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720876|gb|EE097182.1|EE097182
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720543|gb|EE096555.1|EE096555
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110725125|gb|EE101571.1|EE101571
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720651|gb|EE096761.1|EE096761
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110718751|gb|EE095944.1|EE095944
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAGEST: gi|110720554|gb|EE096580.1|EE096580
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
EST: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTG GTCTATGGCAAATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
genomic: ATGGGCTTGTTTATCACCTGAACCTCACAAAGAATACCAAAAGTTTTCTGgtatgcattt ... tgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
ctattttttcccctgaaatgttgaagtatttaactttctcttccatgggtcacagGTCTATGGCATATCATGGCTGGTGATCTGTATAATATTGTTTGTGATGAAG
atttaac putative branch site (score: 3)
ctttctcttccat CT-rich tract
aagtatttaacttt TA-rich tract