Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtatgttttttacttaccatttgccgtagatttgaaaggcattccttagcttacagcatgcaaatgaatattgaagagttcgtgaattgaaataaggtttattttctgtttggttatagctcctctgatttatccatcctattaactttttcagGTTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTGACACCCCAAATCGGAGCCAATGGCATTGATGTTGACCAGTTCTCACCTCC

Basic information

species Vitis vinifera
transcript Vv18s0041g02270.t01
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tattttctgtttggttatagctcctctgatttatccatcctattaactttttcagGTTTCCAGCCAAACGGGCAAGCTCCAATCTCTTGTACAGACAAGCCATTGACACCCCAAATCGGAGCCAATGGCATTGATGTTGACCAGTTCTCACCTCC
                                        tattaac  putative branch site (score: 1)
                                              ctttttc  CT-rich tract
                                        tattaactttttca  TA-rich tract