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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagatataaatgaattatccttgtatgttatttttgcatgcaactgtctttcttatcatgttatagatacaaatttctgcaactgatttgttaattgtttctttcatatgtcagAATTTAGATCAGTTGCTAAGGATATTTGCAAGTTGCCTACGTTCCTCTCCACTACTCTTTTCAGAAGGATTGATGTTAATTTCACTGGGATTGTTACTAG

Basic information

species Vitis vinifera
transcript Vv14s0036g00730.t01
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gttatagatacaaatttctgcaactgatttgttaattgtttctttcatatgtcagAATTTAGATCAGTTGCTAAGGATATTTGCAAGTTGCCTACGTTCCTCTCCACTACTCTTTTCAGAAGGATTGATGTTAATTTCACTGGGATTGTTACTAG
                             tgttaat  putative branch site (score: 3)
                                   ttgtttctttc  CT-rich tract
                          atttgttaattgttt  TA-rich tract