1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tttttaaaaaaatcacgtcttccttttttctttgaactttaattgccctcctctctctaccccattttcttcttgcattgaatttgctgtttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGAAGAATAGGTCCAAGAAGGTCCGAGGTGTAAAGAAG
species | Vitis vinifera |
transcript | Vv14s0030g01620.t01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110362912|gb|EC926471.1|EC926471
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|30321070|gb|CD004332.1|CD004332
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|71866240|gb|DT015295.1|DT015295
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|33406884|gb|CF212511.1|CF212511
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|71872113|gb|DT021168.1|DT021168
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|18458660|gb|BM436938.1|BM436938
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTTTAGGAAGCAAATGAAGGAGAGGEST: gi|30135948|gb|CB921286.1|CB921286
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|37184145|gb|CF603499.1|CF603499
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|351029237|gb|FQ435437.1|FQ435437
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|71874519|gb|DT023574.1|DT023574
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110714825|gb|EE092178.1|EE092178
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110701352|gb|EE078828.1|EE078828
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110407407|gb|EC973007.1|EC973007
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|37187949|gb|CF607300.1|CF607300
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|33406976|gb|CF212603.1|CF212603
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: GCGAAGAAGTACGAGCCTAAGTACAGGCTCATC-CG ATCNTGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAEST: gi|352785814|gb|FQ475817.1|FQ475817
genomic: GCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagA--ATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGA
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|46919451|gb|CN548780.1|CN548780
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110694122|gb|EE070954.1|EE070954
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|32458654|gb|CD799828.1|CD799828
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTTTAGGAAGCAAATGAAGGAGAGGEST: gi|71886870|gb|DT035925.1|DT035925
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: CGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|351053839|gb|FQ441605.1|FQ441605
genomic: CGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|32268605|gb|CD717764.1|CD717764
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110402749|gb|EC963356.1|EC963356
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|87585712|gb|DY474319.1|DY474319
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|32269613|gb|CD718772.1|CD718772
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110400221|gb|EC966773.1|EC966773
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110707923|gb|EE084876.1|EE084876
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|34319409|gb|CF372163.1|CF372163
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|351049488|gb|FQ429110.1|FQ429110
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCACG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110391519|gb|EC956500.1|EC956500
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|34416045|gb|CF414799.1|CF414799
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|77578503|gb|DV218045.1|DV218045
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|22007443|gb|BQ792477.1|BQ792477
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110701262|gb|EE078640.1|EE078640
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAG---TACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|161718020|gb|FC068553.1|FC068553
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAAG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|30253086|gb|CB970637.1|CB970637
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|30296070|gb|CB972864.1|CB972864
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|110396446|gb|EC962132.1|EC962132
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|30253161|gb|CB970712.1|CB970712
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|87585035|gb|DY473961.1|DY473961
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|349813139|gb|FQ411379.1|FQ411379
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|71889488|gb|DT038543.1|DT038543
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGEST: gi|351026260|gb|FQ428272.1|FQ428272
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
EST: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGG AATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
genomic: ATTCAGTTGAGAATGCGAAGAAGTACGAGCCTAAGTACAGGCTCATCAGGgtaaattata ... ttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGG
ccctcctctctctaccccattttcttcttgcattgaatttgctgtttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGAAGAATAGGTCCAAGAAGGTCCGAGGTGTAAAGAAG
attgaattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tttttaaaaaaatcacgtcttccttttttctttgaactttaattgccctcctctctctaccccattttcttcttgcattgaatttgctgtttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGAAGAATAGGTCCAAGAAGGTCCGAGGTGTAAAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - -aaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgctgt