1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...tgacaaaatgcaattctttctttgtatcatagctattaaagatatccccttgtgcttcatctagtgacttgtgaatcacaaattatctttactcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTGATCTTCCAGGAGGAATCCCAGAATCCTGGCCAAAGCTGCTTCAAGCTC
species | Vitis vinifera |
transcript | Vv13s0067g03360.t01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351039070|gb|FQ457745.1|FQ457745
genomic: GGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAG-AACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGEST: gi|349811291|gb|FQ406279.1|FQ406279
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAG
EST: ATGATACTGAAGCTGTTGTTAANGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351042081|gb|FQ456291.1|FQ456291
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGGAAGTTGCTAGAGTTEST: gi|351038944|gb|FQ457619.1|FQ457619
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGG-AAGTTGCTAGAGTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTAACCTGTGGAGGACTTCTACCGCAGTCCGGGGAAGEST: gi|71878429|gb|DT027484.1|DT027484
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAG
EST: GCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|349821723|gb|FQ408161.1|FQ408161
genomic: GCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTEST: gi|351026159|gb|FQ428171.1|FQ428171
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCEST: gi|352772694|gb|FQ472737.1|FQ472737
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGC
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|22014507|gb|BQ799541.1|BQ799541
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|349809244|gb|FQ399018.1|FQ399018
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACTTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|34544146|gb|CF512378.1|CF512378
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351033351|gb|FQ446583.1|FQ446583
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGGAAGTTGCTAGAGTTEST: gi|110382919|gb|EC947249.1|EC947249
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGG-AAGTTGCTAGAGTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|110385590|gb|EC950132.1|EC950132
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|349811437|gb|FQ409433.1|FQ409433
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCCTACCGC-GTCGGGGGAAGTEST: gi|110401329|gb|EC967937.1|EC967937
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTC-TACCGCAGTCGGGGGAAGT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|349811467|gb|FQ409463.1|FQ409463
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTTCCGGGGA-GTTTGCTAGAGEST: gi|352777282|gb|FQ473916.1|FQ473916
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGT-CGGGGGAAGTT-GCTAGAG
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|352786628|gb|FQ479835.1|FQ479835
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACTATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGGAAGTTGCTAGAGTTEST: gi|349818660|gb|FQ403295.1|FQ403295
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGG-AAGTTGCTAGAGTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGGAAGTTGCTAGAGTTEST: gi|110419722|gb|EC985971.1|EC985971
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGG-AAGTTGCTAGAGTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|349821231|gb|FQ404363.1|FQ404363
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAEST: gi|351031699|gb|FQ459956.1|FQ459956
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGA
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAAGGACT-CTACCGCAGEST: gi|349813663|gb|FQ413897.1|FQ413897
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGA-GGACTTCTACCGCAG
EST: ATGATACTGAAGCTGTTGTTAAAGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGEST: gi|351044818|gb|FQ449072.1|FQ449072
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAG
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAEST: gi|352781976|gb|FQ469274.1|FQ469274
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCA
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351036476|gb|FQ457189.1|FQ457189
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351045854|gb|FQ441039.1|FQ441039
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAEST: gi|71877647|gb|DT026702.1|DT026702
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCA
EST: GCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|349821007|gb|FQ404260.1|FQ404260
genomic: GCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTGAGGAACGGCTCCCTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTAEST: gi|349826777|gb|FQ418868.1|FQ418868
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTA
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACCATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|352798752|gb|FQ478387.1|FQ478387
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTAGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351052139|gb|FQ450709.1|FQ450709
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGAEST: gi|349807822|gb|FQ402223.1|FQ402223
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGA
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGGAAGTTGCTAGAGTTEST: gi|352795584|gb|FQ480172.1|FQ480172
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGG-AAGTTGCTAGAGTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGGAGTTGCTAGAGTTTEST: gi|351052923|gb|FQ453910.1|FQ453910
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTAGAGGACTTCTACCGCAEST: gi|349807966|gb|FQ402357.1|FQ402357
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCA
EST: ATGATACTGAAACTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTEST: gi|352781857|gb|FQ469155.1|FQ469155
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351036761|gb|FQ457474.1|FQ457474
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTAAAAACAATGAAATG AGTTTACCTGTGGAGGACEST: gi|351045592|gb|FQ440777.1|FQ440777
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGAC
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAEST: gi|349820194|gb|FQ406870.1|FQ406870
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCA
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGT-GCTAGAGTTTEST: gi|349830927|gb|FQ418211.1|FQ418211
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAAGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGEST: gi|349809165|gb|FQ398906.1|FQ398906
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTG
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTTGGAGGACTTCTACCGCAEST: gi|110382917|gb|EC947247.1|EC947247
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGT-GGAGGACTTCTACCGCA
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTEST: gi|351056586|gb|FQ442414.1|FQ442414
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAATCGGGGGAAGTTGCTAGAGTTEST: gi|349815144|gb|FQ410367.1|FQ410367
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCEST: gi|349810804|gb|FQ403047.1|FQ403047
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTC
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGAAGGACTTCTACCGCAGCCGGGGGAAGTTEST: gi|349818669|gb|FQ403503.1|FQ403503
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTT
EST: TGAAACTGAAGCTGTTGGTTA-GGAACGGCTCCGTATATACAATGAAATG AGTTTACCCTGTGGAGGACTTCTACCCCAGTCGGGGGGAAGTEST: gi|34363775|gb|CF405360.1|CF405360
genomic: TGATACTGAAGCTGTTG-TTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACC-TGTGGAGGACTTCTACCGCAGTCGGGGG-AAGT
EST: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATG AGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
genomic: ATGATACTGAAGCTGTTGTTAAGGAACGGCTCCGTATATACAATGAAATGgtattactcc ... actcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTT
ccccttgtgcttcatctagtgacttgtgaatcacaaattatctttactcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTGATCTTCCAGGAGGAATCCCAGAATCCTGGCCAAAGCTGCTTCAAGCTC
ttatctttactcct CT-rich tract
acaaattatcttta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgacaaaatgcaattctttctttgtatcatagctattaaagatatccccttgtgcttcatctagtgacttgtgaatcacaaattatctttactcctacagAGTTTACCTGTGGAGGACTTCTACCGCAGTCGGGGGAAGTTGCTAGAGTTTGATCTTCCAGGAGGAATCCCAGAATCCTGGCCAAAGCTGCTTCAAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
-gacaaaa
- - - - - - - - - - - - - -catagct
- - - - - - - - - - - - - - - - - - -aaagata
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgacttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cacaaat