1 5' 3' | 2 5' 3' | 3 5' 3' |
...ccatgataccatgccatgttaaccatttttatcttttatcccaatgcttttttagattttacttaattcatgttgatgatttctatgtgtttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACATGGGTTACCATTCCCAAAGGACCAACCCATGGGAGTGTACAGCTCTATA
species | Vitis vinifera |
transcript | Vv12s0134g00160.t01 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351017461|gb|FQ435814.1|FQ435814
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351028725|gb|FQ433155.1|FQ433155
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351040743|gb|FQ438287.1|FQ438287
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATAGAGAAACAEST: gi|110686933|gb|EE063904.1|EE063904
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351029572|gb|FQ427412.1|FQ427412
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|34319415|gb|CF372169.1|CF372169
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: CTACACATTCATGTGGAATCAGCGGCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACNNCAACATGGAGAAACAEST: gi|349827004|gb|FQ419095.1|FQ419095
genomic: CTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351027321|gb|FQ444570.1|FQ444570
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349825987|gb|FQ415792.1|FQ415792
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACCCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351012306|gb|FQ429991.1|FQ429991
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110709651|gb|EE085300.1|EE085300
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349832943|gb|FQ423065.1|FQ423065
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71867531|gb|DT016586.1|DT016586
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349825692|gb|FQ421791.1|FQ421791
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110699501|gb|EE076556.1|EE076556
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349829506|gb|FQ420038.1|FQ420038
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351040990|gb|FQ443766.1|FQ443766
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351052121|gb|FQ455414.1|FQ455414
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGGCTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|30253115|gb|CB970666.1|CB970666
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71866834|gb|DT015889.1|DT015889
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71875269|gb|DT024324.1|DT024324
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71869588|gb|DT018643.1|DT018643
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349832307|gb|FQ420868.1|FQ420868
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351015305|gb|FQ445589.1|FQ445589
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|161712829|gb|FC062352.1|FC062352
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110390828|gb|EC955759.1|EC955759
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110421392|gb|EC987688.1|EC987688
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351012384|gb|FQ426985.1|FQ426985
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349823526|gb|FQ414936.1|FQ414936
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71866337|gb|DT015392.1|DT015392
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110688683|gb|EE067515.1|EE067515
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110381292|gb|EC946616.1|EC946616
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110693623|gb|EE070014.1|EE070014
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349829444|gb|FQ419976.1|FQ419976
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACATGTGCACACCAACATGGAGAAACGEST: gi|349830610|gb|FQ416908.1|FQ416908
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351040330|gb|FQ434463.1|FQ434463
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGTACACCAACATGGAGAAACAEST: gi|351041004|gb|FQ443780.1|FQ443780
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTAGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|34416827|gb|CF415581.1|CF415581
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351026240|gb|FQ428252.1|FQ428252
genomic: ACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349828623|gb|FQ418358.1|FQ418358
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCTAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAAAAACAEST: gi|110398647|gb|EC965117.1|EC965117
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110691103|gb|EE068821.1|EE068821
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110685903|gb|EE063040.1|EE063040
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351031870|gb|FQ460127.1|FQ460127
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATAGAGAAACAEST: gi|71868382|gb|DT017437.1|DT017437
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351016494|gb|FQ423921.1|FQ423921
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGCGTGCACACCAACATGGAGAAACAEST: gi|349828094|gb|FQ415422.1|FQ415422
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|51052566|gb|CO819625.1|CO819625
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351025289|gb|FQ434302.1|FQ434302
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110690222|gb|EE067132.1|EE067132
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351012970|gb|FQ433697.1|FQ433697
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351013795|gb|FQ433947.1|FQ433947
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGGCCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349830705|gb|FQ417003.1|FQ417003
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCGCTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAGCATGGAGAAACAEST: gi|110687595|gb|EE065187.1|EE065187
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351033100|gb|FQ446453.1|FQ446453
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|34320087|gb|CF372841.1|CF372841
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: AAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCCAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACCCCAACATGGAGAAACAEST: gi|351034298|gb|FQ448095.1|FQ448095
genomic: AAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71865855|gb|DT014910.1|DT014910
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110686348|gb|EE063884.1|EE063884
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349828857|gb|FQ419190.1|FQ419190
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71871566|gb|DT020621.1|DT020621
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|349816739|gb|FQ404986.1|FQ404986
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|110362225|gb|EC925743.1|EC925743
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|71866631|gb|DT015686.1|DT015686
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|34415420|gb|CF414174.1|CF414174
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: TCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACNNCAACATGGAGAAACAEST: gi|351018859|gb|FQ425761.1|FQ425761
genomic: TCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACAEST: gi|351031433|gb|FQ446636.1|FQ446636
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
EST: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGT ATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
genomic: ACCAAGGACTTCCACTCCTACACATTCATGTGGAATCAGCGCCAAGTTGTgtaagctctt ... ttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACA
gcttttttagattttacttaattcatgttgatgatttctatgtgtttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACATGGGTTACCATTCCCAAAGGACCAACCCATGGGAGTGTACAGCTCTATA
tgttgat putative branch site (score: 4)
tttttgctc putative PPT
tttagattttacttaa TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ccatgataccatgccatgttaaccatttttatcttttatcccaatgcttttttagattttacttaattcatgttgatgatttctatgtgtttttgctcagATTTCTTGTGGATGAGACCCCAGTACGTGTGCACACCAACATGGAGAAACATGGGTTACCATTCCCAAAGGACCAACCCATGGGAGTGTACAGCTCTATA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
ccatgat
- - - - ccatgcc
- - - - - - - - - - - ccatttt
- - - - - - - - - - - - - - - - - - -atcccaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcatgtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctatgtg