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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gcttcatgttgctattgaagtttgatctcataaatcacctacgtatattagcagttgtccataatgattttactcgactattcctactttgttttcaagGTCTTAG

Basic information

species Vitis vinifera
transcript Vv09s0054g01200.t01
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

atattagcagttgtccataatgattttactcgactattcctactttgttttcaagGTCTTAG
                                    ttcctactttgttttc  CT-rich tract
                ataatgattttact  TA-rich tract