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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gacgatttgtgaataaatagttaaattcaggaacaagatctgatttatggatggataattgaattgggtgacaaggtctgatgggatccatttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACCATGGAGGATATACTGACACAGCTGAAGAAGGAGATGGCTGCGCCACAAA

Basic information

species Vitis vinifera
transcript Vv08s0007g02580.t01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA10G09280.1 (Glycine max), 3'ss of exon 3
gacgatttgtgaataaatagttaaattcaggaacaagatctgatttatggat----ggataattgaattgggtgacaaggtctgatgggatccatttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACCATGGAGGATATACTGACACAGCTGAAGAAGGAGATGGCTGCGCCACAAA
     ||     ||  ||  | ||  | |    ||   ||   |||    |      ||   || |  || |   |||| | |   |   |  |  ||  |||||| ||||| ||||| |||||  |||| |||||||||||  | ||||||||||||||||| |||||||| |||||||||||||| |||||||| || || |
---acttctcatatttatgat-aatgtgaaatccacagtccattttgcaaacttaaagactgtttatctgcgaagcaagatttatagacttgtaaatgaaacagGTTGAACCAAAGAAATTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGACATACTGACCCAGCTGAAGAAGGAAATGGCTGCTCCTCATA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA02G35990.1 (Glycine max), 3'ss of exon 3
gacgatttgtgaataaatagttaaattcaggaacaagatctgatttat-ggatggataattgaat---tgggtgacaaggtctgatgggatccatttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACCATGGAGGATATACTGACACAGCTGAAGAAGGAGATGGCTGCGCCACAAA
|||  ||      |  ||  |||  |     ||     || | ||||| || |  |||| | | |   || |||||||| | |     ||      ||  |||||| ||||| ||||| |||||  |||| |||||||||||  | ||||||||||||||||| |||||||| |||||||||||||| ||||| || || || |
gacacttctcatgtttatgatta--tgagaaaattcagtccgttttattggcttaataactaattatctgtgtgacaagatttat--agacttgaatgaaacagGTTGAACCAAAGAAATTTGGTCTTCTTGCAAATTGGCAAAGAGAGTACACCATGGAGGACATACTGACCCAGCTGAAGAAGGAAATGGCCGCTCCTCATA
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110415188|gb|EC981067.1|EC981067
EST:     CCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: CCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|27586596|gb|CB009291.1|CB009291
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32271925|gb|CD721084.1|CD721084
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110707841|gb|EE084698.1|EE084698
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110375474|gb|EC940462.1|EC940462
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|87584965|gb|DY473918.1|DY473918
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110422544|gb|EC988870.1|EC988870
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110732951|gb|EE108687.1|EE108687
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|349822453|gb|FQ412717.1|FQ412717
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|26258536|gb|CA809599.1|CA809599
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTTTGGCAAATTGGCAGCGGGAGTACCCC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110714378|gb|EE091219.1|EE091219
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110724375|gb|EE100150.1|EE100150
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351038696|gb|FQ464562.1|FQ464562
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32270788|gb|CD719947.1|CD719947
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|27583675|gb|CB006370.1|CB006370
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110687069|gb|EE064159.1|EE064159
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110717388|gb|EE093211.1|EE093211
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110730308|gb|EE107240.1|EE107240
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|28968921|gb|CB347954.1|CB347954
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351019361|gb|FQ429523.1|FQ429523
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|349829575|gb|FQ421093.1|FQ421093
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32271546|gb|CD720705.1|CD720705
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110732231|gb|EE107337.1|EE107337
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110384897|gb|EC949365.1|EC949365
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|349810098|gb|FQ401544.1|FQ401544
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGAAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|83274982|gb|DV939078.1|DV939078
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110709713|gb|EE085412.1|EE085412
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110394930|gb|EC960357.1|EC960357
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110707782|gb|EE084575.1|EE084575
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110425147|gb|EC991525.1|EC991525
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110694527|gb|EE071709.1|EE071709
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110414068|gb|EC979891.1|EC979891
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351027465|gb|FQ444714.1|FQ444714
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|87585166|gb|DY473996.1|DY473996
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110700471|gb|EE078547.1|EE078547
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|71880853|gb|DT029908.1|DT029908
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110427088|gb|EC993519.1|EC993519
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110390632|gb|EC955552.1|EC955552
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30126250|gb|CB911589.1|CB911589
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|27580258|gb|CB002953.1|CB002953
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|18459279|gb|BM437557.1|BM437557
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|34319675|gb|CF372429.1|CF372429
EST:     GTTTTCATTCNCGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110714562|gb|EE091611.1|EE091611
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110410337|gb|EC976018.1|EC976018
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30326581|gb|CD009843.1|CD009843
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110360971|gb|EC924417.1|EC924417
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110733131|gb|EE109052.1|EE109052
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|77580127|gb|DV218959.1|DV218959
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30322852|gb|CD006114.1|CD006114
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|71872066|gb|DT021121.1|DT021121
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110724044|gb|EE099525.1|EE099525
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|27582163|gb|CB004858.1|CB004858
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|18458325|gb|BM436603.1|BM436603
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351022026|gb|FQ437813.1|FQ437813
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|28969001|gb|CB348034.1|CB348034
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACCCC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32271584|gb|CD720743.1|CD720743
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110710620|gb|EE087153.1|EE087153
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351031308|gb|FQ445333.1|FQ445333
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCCGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|349830651|gb|FQ416949.1|FQ416949
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCGGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30251839|gb|CB969572.1|CB969572
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|27584334|gb|CB007029.1|CB007029
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110397673|gb|EC963488.1|EC963488
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|34320462|gb|CF373216.1|CF373216
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110714642|gb|EE091779.1|EE091779
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110708726|gb|EE086599.1|EE086599
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|18458066|gb|BM436344.1|BM436344
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30323632|gb|CD006894.1|CD006894
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110722674|gb|EE099112.1|EE099112
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32272487|gb|CD721646.1|CD721646
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32249430|gb|CD715249.1|CD715249
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110420507|gb|EC986781.1|EC986781
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACCCC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|27584241|gb|CB006936.1|CB006936
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110724748|gb|EE100845.1|EE100845
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|71870381|gb|DT019436.1|DT019436
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110723215|gb|EE100269.1|EE100269
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|71879441|gb|DT028496.1|DT028496
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAACAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351028883|gb|FQ434884.1|FQ434884
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110413325|gb|EC979104.1|EC979104
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|161713525|gb|FC063126.1|FC063126
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30134219|gb|CB919557.1|CB919557
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110373778|gb|EC938122.1|EC938122
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32269247|gb|CD718406.1|CD718406
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32248493|gb|CD714312.1|CD714312
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110717766|gb|EE093911.1|EE093911
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32247778|gb|CD713597.1|CD713597
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110374794|gb|EC939726.1|EC939726
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351022650|gb|FQ428559.1|FQ428559
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32245976|gb|CD711795.1|CD711795
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|22010006|gb|BQ795040.1|BQ795040
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110703986|gb|EE081402.1|EE081402
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110733055|gb|EE108882.1|EE108882
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|26257778|gb|CA808841.1|CA808841
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|32268908|gb|CD718067.1|CD718067
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|30127863|gb|CB913202.1|CB913202
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|349823964|gb|FQ417351.1|FQ417351
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110422900|gb|EC989234.1|EC989234
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|46917736|gb|CN547065.1|CN547065
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110703067|gb|EE079588.1|EE079588
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110697815|gb|EE075221.1|EE075221
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|34320870|gb|CF373624.1|CF373624
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|110695767|gb|EE074160.1|EE074160
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|351040256|gb|FQ425342.1|FQ425342
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
EST: gi|26265421|gb|CA816484.1|CA816484
EST:     GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTG                         GTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC
genomic: GTTTTCATTCACGGATCAACATGACTTGTGTTAACCATGAAACTGGAGTGgtaaaatttt ... tttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatggatggataattgaattgggtgacaaggtctgatgggatccatttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACCATGGAGGATATACTGACACAGCTGAAGAAGGAGATGGCTGCGCCACAAA
                              gtctgat  putative branch site (score: 4)
                                         tccattt  putative PPT
         ataattgaatt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gacgatttgtgaataaatagttaaattcaggaacaagatctgatttatggatggataattgaattgggtgacaaggtctgatgggatccatttgttacagGTGGAACCTAAGAAGTTTGGAATTCTGGCAAATTGGCAGCGGGAGTACACCATGGAGGATATACTGACACAGCTGAAGAAGGAGATGGCTGCGCCACAAA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT
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- - - - - - - - - - - - - - -ggaacaa
- - - - - - - - - - - - - - - - - - - - - - - -tggatgg
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ttgggtg
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