Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgtgtgtattgagcactcaactttcatttgtatcaatgttgtgagactgttaatcatctcggggaaactttgtgcagATGCTTCACAGAGTCCATCTATAACACCAGTTCCATCTCATGGATTGGCTGAACCAGTTTTGCCATCACCTGAAAGTCAACCGGCTGGCATCCAACAGCA

Basic information

species Vitis vinifera
transcript Vv05s0029g00130.t01
intron # 3
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttcatttgtatcaatgttgtgagactgttaatcatctcggggaaactttgtgcagATGCTTCACAGAGTCCATCTATAACACCAGTTCCATCTCATGGATTGGCTGAACCAGTTTTGCCATCACCTGAAAGTCAACCGGCTGGCATCCAACAGCA
                         tgttaat  putative branch site (score: 3)
                           ttaatcat  TA-rich tract