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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT

Basic information

species Vitis vinifera
transcript Vv05s0020g04790.t01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA05G35030.1 (Glycine max), 3'ss of exon 2
-aattttctgtagtattttgttaatagtcaattatgagttacgagggtta----tagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
 | | |  |||   |  | | | ||||    ||||    |  |||| |||    ||| || |  |||      | |   ||  ||       ||||||    |||||| | || || ||||| ||||||||||||||||| ||| | ||||| || ||||| ||||| || || ||||| |||||||| ||||||||||| ||||
tattctgttgtttgagatggattatagatgtttatttcctgtgaggtttaattgtaggaaatgacttgtctgcttaacaatcctttc-----tgttttttcacagAAAAGAGAAGCTCCACCAGGTGAGAAGCCAGAACCTGTCCGCACCCACCTCCGCAACATGATTATTGTGCCTGAGATGATTGGTAGCATTATTGGAGTGT

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA08G04690.1 (Glycine max), 3'ss of exon 1
aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
  || | ||   |   || |  ||| |   ||       |      || ||| || | |||||    || |   ||  |     |  ||||| |   |||||| | || || ||||| ||||||||||||||||||||  | ||||| || ||||| ||||| || || ||||| |||||||| ||||||||||| ||||
tgttgtttgagatggattatagatatttgttttctgtgaagtttaattgtaggaattagcttctctgtttaacaatcatatcctttttgtttggtcacagAAAAGGGAAGCTCCACCAGGTGAGAAGCCAGAACCAGTACGCACCCACCTCCGCAACATGATTATTGTGCCTGAGATGATTGGTAGCATTATTGGAGTGT

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA07G39980.1 (Glycine max), 3'ss of exon 2
aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
                  ||   || | | ||      |  |    || ||     ||  |    |  |||      ||||    | | |  || |  ||||| | || || ||| | ||||||||||||||||||||  | |||||||| ||||| ||||| || || ||||| |||||||| ||||| ||||| || |
------------------gtatgtatttattttctgtctgtgttcatttta-----tttttctgtctatgatatcaatttgcttcattttgatggaatagAAAAGGGAAGCACCAGCAGGTGAGAAGCCAGAACCAGTTCGCACCCATCTCCGCAACATGATTATTGTGCCTGAGATGATTGGTAGCATCATTGGAGTCT

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: PP1S164_64V6.1 (Physcomitrella patens), 3'ss of exon 3
----------------------------aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
                            |  ||| |    | |   |  |  |||   |||| |      |   || ||  || ||  ||  || |  |   ||  |  |||     |||||   ||||| ||||| || | |||||||||||| || || || |||||||| ||||| ||||| |||||||| || || |||||||| |  ||| | ||||| || |
gtaagctccaagtgcttacttcttcattatctttttacgttttaaagacagcagttccttatcacactgaatttttctaccaa-ttaattgtgcttacatgcatcgtcatggcccgtttttg---cagAAGCGTGAAGCACTACCTGGTGAGAAACCTGAGCCTGTCAGAACACATCTTCGCAACATGATCATTGTGCCAGAAATGATCGCGAGCGTAATTGGTGTTT

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: EFJ26930 (Selaginella moellendorffii), 3'ss of exon 2
aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttg--tggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
                                          | | | || ||   || |||     |    |  || |||  |  |  |||  ||  | ||||||||||||||||  ||||||||||||| || |||||  |||| ||||| || |  ||||||||||| || || |||||||| ||||| |||||||| |
----------------------------------------gtaagttcatcgatcttttctttgttttgcttttcttattgattccttgtgtcctgcgt-agAAACGTGAGGCCCCGGCTGGTGAGAAGCCCGAGCCAGTGCGAACGCATCTCCGGAGCATGATCATCGTCCCAGAGATGATTGGCAGCATCATTGGCGTCT

upper sequence: Vv05s0020g04790.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: EFJ26636 (Selaginella moellendorffii), 3'ss of exon 2
aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttg--tggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
                                          | | | || ||   || |||      |   |  || |||  |  |  ||| |||  | ||||||||||||||||  ||||||||||||| || |||||  |||| ||||| || |  ||||||||||| || || |||||||| ||||| |||||||| |
----------------------------------------gtaagttcatcgatcttttctttgtttctcttttcttattgattccttgtgtcttgcgt-agAAACGTGAGGCCCCGGCTGGTGAGAAGCCCGAGCCAGTGCGAACGCATCTCCGGAGCATGATCATCGTCCCAGAGATGATTGGCAGCATCATTGGCGTCT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37188598|gb|CF607947.1|CF607947
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|34319515|gb|CF372269.1|CF372269
EST:     GGGGACTGAAGCGAAAGCCCATGNCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110704716|gb|EE081710.1|EE081710
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71877107|gb|DT026162.1|DT026162
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|37184100|gb|CF603454.1|CF603454
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110371821|gb|EC935945.1|EC935945
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|349828484|gb|FQ417226.1|FQ417226
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110694526|gb|EE071708.1|EE071708
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351025559|gb|FQ435252.1|FQ435252
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCACCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|18458131|gb|BM436409.1|BM436409
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110686946|gb|EE063924.1|EE063924
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77588158|gb|DV223290.1|DV223290
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110379769|gb|EC944988.1|EC944988
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351029306|gb|FQ436700.1|FQ436700
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|30251456|gb|CB969189.1|CB969189
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77577910|gb|DV217706.1|DV217706
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110365942|gb|EC929512.1|EC929512
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77578614|gb|DV218098.1|DV218098
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|349809166|gb|FQ398939.1|FQ398939
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCA-AACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|349830270|gb|FQ420530.1|FQ420530
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110407345|gb|EC972945.1|EC972945
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351017623|gb|FQ435976.1|FQ435976
EST:     GGGGACTGAAGCGAAAGCTCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77583878|gb|DV220976.1|DV220976
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110695453|gb|EE073486.1|EE073486
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110364566|gb|EC927915.1|EC927915
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110381405|gb|EC934361.1|EC934361
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110424672|gb|EC991040.1|EC991040
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|83276291|gb|DV940299.1|DV940299
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351027821|gb|FQ448391.1|FQ448391
EST:     GGGGACTGAAGCGAAAGCC-ATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110688037|gb|EE066133.1|EE066133
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|34416796|gb|CF415550.1|CF415550
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|22015116|gb|BQ800150.1|BQ800150
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCGGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110394480|gb|EC959497.1|EC959497
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77584585|gb|DV221375.1|DV221375
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71867492|gb|DT016547.1|DT016547
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110689983|gb|EE066683.1|EE066683
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|34416838|gb|CF415592.1|CF415592
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77586502|gb|DV222367.1|DV222367
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|30132671|gb|CB918010.1|CB918010
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351041241|gb|FQ444218.1|FQ444218
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAGGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|30137318|gb|CB922656.1|CB922656
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71875245|gb|DT024300.1|DT024300
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110364798|gb|EC928306.1|EC928306
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77580555|gb|DV219173.1|DV219173
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110422790|gb|EC989121.1|EC989121
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110369440|gb|EC933600.1|EC933600
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|30136064|gb|CB921402.1|CB921402
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110417618|gb|EC983688.1|EC983688
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATTTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110717213|gb|EE092875.1|EE092875
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|349829993|gb|FQ420253.1|FQ420253
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110428822|gb|EC995303.1|EC995303
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71873366|gb|DT022421.1|DT022421
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110702977|gb|EE079421.1|EE079421
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|37188630|gb|CF607979.1|CF607979
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|30298176|gb|CB974970.1|CB974970
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110404697|gb|EC970161.1|EC970161
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|87583898|gb|DY473270.1|DY473270
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|37188986|gb|CF608335.1|CF608335
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|34320744|gb|CF373498.1|CF373498
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351038157|gb|FQ465274.1|FQ465274
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110398814|gb|EC965289.1|EC965289
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71869424|gb|DT018479.1|DT018479
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71872025|gb|DT021080.1|DT021080
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77584128|gb|DV221103.1|DV221103
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77583913|gb|DV220995.1|DV220995
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77578085|gb|DV217809.1|DV217809
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110381380|gb|EC946709.1|EC946709
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110696352|gb|EE072395.1|EE072395
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110390782|gb|EC955710.1|EC955710
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|37184474|gb|CF603828.1|CF603828
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77577399|gb|DV217415.1|DV217415
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110397866|gb|EC963819.1|EC963819
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71876672|gb|DT025727.1|DT025727
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351015890|gb|FQ431845.1|FQ431845
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77577693|gb|DV217590.1|DV217590
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|22013129|gb|BQ798163.1|BQ798163
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77581184|gb|DV219519.1|DV219519
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110396727|gb|EC962422.1|EC962422
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|77587718|gb|DV223038.1|DV223038
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71871968|gb|DT021023.1|DT021023
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110409776|gb|EC975446.1|EC975446
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|29783208|gb|CB349237.2|CB349237
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351014308|gb|FQ437310.1|FQ437310
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110414770|gb|EC980623.1|EC980623
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110397724|gb|EC963572.1|EC963572
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110690501|gb|EE067656.1|EE067656
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110731761|gb|EE106454.1|EE106454
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110401901|gb|EC968526.1|EC968526
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|37184054|gb|CF603408.1|CF603408
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110383275|gb|EC947637.1|EC947637
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110401541|gb|EC968153.1|EC968153
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351040161|gb|FQ425247.1|FQ425247
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71873638|gb|DT022693.1|DT022693
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71866028|gb|DT015083.1|DT015083
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|71868599|gb|DT017654.1|DT017654
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|351016861|gb|FQ424288.1|FQ424288
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110692442|gb|EE071688.1|EE071688
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
EST: gi|110368900|gb|EC933034.1|EC933034
EST:     GGGGACTGAAGCGAAAGCCCATGGCCTTGATCAAGAAGCTTCGCAAGGCG                         AAACGTGAGGCACCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG
genomic: GGGGACTGAAGCGAAAGCCCATGGCATTGATCAAGAAGCTTCGCAAGGCGgtaattgttt ... tttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gttatagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT
                        gactgat  putative branch site (score: 3)
                                       taatgtttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
aattttctgtagtattttgttaatagtcaattatgagttacgagggttatagaaacttgcttcagccttgactgatttttgtggtaatgttttgaatcagAAACGTGAGGCCCCACCTGGTGAGAAGCCAGAACCAGTCAGAACCCATCTGCGCAATATGATCATCGTACCTGAAATGATTGGAAGCATTATTGGCGTGT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - atagaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgactga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ttgtggt