Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT

Basic information

species Vitis vinifera
transcript Vv02s0025g03390.t01
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: LOC_Os04g47220.1 (Oryza sativa), 3'ss of exon 2
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgcttt-cagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                   |    |  | ||  |||    |||    |     |||| |   ||| |   || | | ||||  || | |    ||    ||  || | | | ||||||||||||||||| || || |||||||| ||||| ||||||||||| ||||| ||| | |||||||| || |||||||||||||||||| | | |  | 
---------------tattactgtatgataagtctacatcattagtgaggacatgattgagcaatggcacttaattacaagcactaactcccgctgcaatttgctggttctgcagTGGATCTTCTGGGTTGGCCCCTTCATTGGCGCTGCCCTTGCTGCCATCTACCACCAGGTGGTCATCAGGGCAATTCCATTCAAGAGCAGGTCGTAACCTG

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: LOC_Os02g44630.3 (Oryza sativa), 3'ss of exon 2
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgcttt--cagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
               |   |  |    |  | | ||      ||||| ||     | |  || |        ||    |  || |  ||   | ||||  | |||   |||  ||||||||||||||||| || || ||| |||| ||||| || |||||||| ||||| ||| |  ||||||| || || ||||||||||||||| ||| ||   
--------------tacttagtagcttaccagcttactagcctttgc-tcaagaaaagagtagaagacacgacaaag-agtttttccttacaaattttggtatctaaattttgcagTGGATCTTCTGGGTTGGTCCCTTCGTTGGCGCTGCCCTGGCTGCCATCTACCACCAGGTGATCATCAGGGCGATCCCATTCAAGAGCAGGTCTTAAGCCC

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: AC209208.3_FGT002 (Zea mays), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaag--ttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
         | ||||  |   |  ||  ||    | |    || |  || | |  ||| ||||       ||     | ||   || | || | || | |  |   ||   | ||||||||||||||||| || || |||||||| |||||||| |||||||| ||||| ||| |  ||||||||||||| || |||||||||||| ||| |    
---------tagatggcatgtattaactaa----tgatcctttgttaatgcatgcatgtttaatcctctattggtaccgaggagtcgtgttataacctatgattgttt---tgcagTGGATCTTCTGGGTCGGCCCCTTCATTGGCGCTGCTCTGGCTGCCATCTACCACCAGGTGATCATCAGAGCCATCCCGTTCAAGAGCAGGTCTTAA----

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GRMZM2G392975_T02 (Zea mays), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
         | | || |    |     |  |  | ||||  | |  |   || ||  | ||   |  |  |       ||  ||||  |||   || | | |  ||| || ||||||||||||||||| || || ||||| || || || || |||||||| ||||| ||| |  ||||||| ||||| || |||||||||||| ||| || | 
---------tagctgtgtgttaggcttatca--cgaaggcttgtctccatctatgtagcttgtctccatctgtgccataacctcttcctgt---ttctatacgattgtttgcagTGGATCTTCTGGGTCGGCCCCTTCATCGGCGCCGCCCTGGCTGCCATCTACCACCAGGTGATCATCAGGGCCATCCCGTTCAAGAGCAGGTCTTAAGCTG

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GRMZM2G392975_T03 (Zea mays), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                                                           ||   |  |  |       ||  ||||  |||   || | | |  ||| || ||||||||||||||||| || || ||||| || || || || |||||||| ||||| ||| |  ||||||| ||||| || |||||||||||| ||| || | 
----------------------------------------------------------cttgtctccatctgtgccataacctcttcctgt---ttctatacgattgtttgcagtggatcttctgggtcggccccttcatcggcgccgccctggctgccatCTACCACCAGGTGATCATCAGGGCCATCCCGTTCAAGAGCAGGTCTTAAGCT-

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GRMZM2G081843_T01 (Zea mays), 3'ss of exon 1
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattg-agtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                         |     |     |  || | |     |   ||  | |   ||  |    |||||| |       |  || ||    | |  |  || ||||||||||||||||| || || ||||| || ||||||||||| ||||| |||||   | |  ||||||| ||| | || ||||||||| | |  |||   |
----------------------gtgagtttcattctggccatgtcgatcgatcgaattctcatgctgcggcgcgagttcatgactgaccttggatttgaactattattattgcagTGGATCTTCTGGGTTGGCCCCTTCATCGGTGCTGCTCTTGCCGCCATCTACCACGTGGTCATCATCAGGGCCCTCCCCTTCAAGAGCCGTGACTGATTAT

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GRMZM2G174807_T01 (Zea mays), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagtt-caagttcttattgtgacttttttt--ctcttgcttt--cagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                       |     |  |    |  |  || |||     |    |  ||    || ||  |  || | | ||  ||   || |       |  ||| ||  ||||||||||||||||| || || ||||| || ||||| || |||||||| ||||| ||| |  ||||||| || || || |||||||| ||| ||| |    
-------------------ttgtagtggcagccacccgctaccttccatgacaaggacctgcaaaaacgtctccctcgcatgctattgctgaccctctcaccgatttgtgccttggcagTGGATCTTCTGGGTCGGCCCCTTCATCGGCGCTGCGCTGGCTGCCATCTACCACCAGGTGATCATCAGGGCGATCCCGTTCAAGAGTAGGTCTTAAAGGA

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA08G01860.1 (Glycine max), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaat-tgagtttcagttcaagttcttattgtgacttttt-ttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
  |    |||| |  |       |       |     |  |||||  | ||       | || || |  | || | |  ||     || ||| | ||||| || | | | || |||||||| |||||||| ||||| |||||||||||||| ||||||||  |||| || |||||||||||| |||||||||| |||||||  |||||||  | | 
--aaacatttttacta-------atttgtgcattctcgttattttaaaccccacagaagatatatatatgctttaat--aa-----taatgtaattttttattttatggtttacagTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCTGCTGTGTATCACCAGATAGTCATCCGAGCCATTCCTTTCAAGACAAGGGCTTAGGCTC

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA05G37730.1 (Glycine max), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
            |  | |    |  || || || |    |   ||  |  || | |      |  |  |  | |  | |   | | ||| |   |||| || | | | ||  ||||||| |||||||| ||||| |||||||||||||| ||||||||  |||| || |||||||||||| ||||||| || |||||||  |||||||  | | 
-----------taaaacattttactaataacacattctaatcattaaactctataaaaaaatatatatgccttaaataataatgtaatttt---ttttattttgtggtttatagTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCTGCTGTGTATCACCAGATAGTCATCCGAGCCATCCCTTTCAAGACAAGGGCTTAGGCTC

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA11G02530.1 (Glycine max), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                       | | | |   |     | || ||   |  ||  || ||    |||   | | || |   | | | |||    ||||   | | |||| |||||||| |||||||| ||||| |||||||||||||| ||||| ||  | || || |||||||| ||| |||| |||||||||||||  |||| || |    
---------------------gtatatacatgtcctttcacttatgtgcctctt--tgttttgcatgaaagtgacttta---tttaactgtttaattttaattgtggcttacagTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCAGCTTTATATCACCAGATAGTGATCCGAGCAATTCCATTCAAGACAAGGGGTTAATCAA

upper sequence: Vv02s0025g03390.t01 (Vitis vinifera), 3'ss of exon 3
lower sequence: GLYMA01G42950.1 (Glycine max), 3'ss of exon 3
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagt--ttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                           | |   |     | || ||   |  ||  |  ||      |||   | | || | | | | ||| ||| |||         |||| |||||||| |||||||| ||||| |||||||||||||| ||||||||  | || || |||||||| ||| |||| ||||| |||||||  |||| || |    
-------------------------gtatatgtcctttcacttatgtgcctctttgtttttcttacaagtgacttatttaacggtttaattttgattttg--------gcttacagTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCCCTTGCTGCTGTATATCACCAGATAGTGATCCGAGCAATTCCTTTCAAGACAAGGGGTTAACCAA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|352795143|gb|FQ477253.1|FQ477253
EST:     GTCTTGGAGCTGCTATCTTCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCAGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110699602|gb|EE076742.1|EE076742
EST:     GTCTTGGAGCTGCTATCATCTTCAA-AGAGAGCATGCATGGGATGACATG                         -GGAATCTCCTGGGTGGGACCGTTC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGA-TCTTCTGGGTGGGACCGTTC
EST: gi|110689831|gb|EE066398.1|EE066398
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGGACC-TTCATTGGAGCTGCTCTTGC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGG-ACCGTTCATTGGAGCTGCTCTTGC
EST: gi|110393386|gb|EC958589.1|EC958589
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|37185605|gb|CF604958.1|CF604958
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110393439|gb|EC958679.1|EC958679
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|71870234|gb|DT019289.1|DT019289
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|33405135|gb|CF210762.1|CF210762
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110700581|gb|EE077371.1|EE077371
EST:     GTCTTGGAGCTGCTATC-TCTTCA-CAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACAGT-CATTG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTG
EST: gi|110707469|gb|EE083902.1|EE083902
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCACGCATGGGATGACATG                         TGGATCTTCTG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTG
EST: gi|87586384|gb|DY474671.1|DY474671
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTG
EST: gi|110368183|gb|EC932152.1|EC932152
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|30131483|gb|CB916822.1|CB916822
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCCTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110372544|gb|EC936722.1|EC936722
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|71869347|gb|DT018402.1|DT018402
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|34545199|gb|CF513431.1|CF513431
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110394135|gb|EC958676.1|EC958676
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|30298996|gb|CB975790.1|CB975790
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|352791255|gb|FQ477541.1|FQ477541
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGG-ACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|30297912|gb|CB974706.1|CB974706
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGAACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110404357|gb|EC969291.1|EC969291
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGGATCT-CTGGGT
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGG-ATCTTCTGGGT
EST: gi|110370008|gb|EC934182.1|EC934182
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|219554947|gb|FG984736.1|FG984736
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCCTTCATTGGAGCTGCTCTTGCTGCCATGT
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGT
EST: gi|30128185|gb|CB913524.1|CB913524
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCCTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|352789589|gb|FQ476187.1|FQ476187
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110393792|gb|EC959288.1|EC959288
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110368511|gb|EC932492.1|EC932492
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|33402806|gb|CF208433.1|CF208433
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110403384|gb|EC964996.1|EC964996
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110403205|gb|EC964535.1|EC964535
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110372061|gb|EC936204.1|EC936204
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTG
EST: gi|352789643|gb|FQ476241.1|FQ476241
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|161709432|gb|FC058827.1|FC058827
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110403825|gb|EC969609.1|EC969609
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110365757|gb|EC929186.1|EC929186
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|32456441|gb|CD797615.1|CD797615
EST:     GTCTTGGAGCTGCTATCATTTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATTTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|34548752|gb|CF516984.1|CF516984
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|33406416|gb|CF212043.1|CF212043
EST:     TCTTGGAGCTGCTATCATCGATCGA-AGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGGAC-GTTCATTGGAGCTGCTCTTG
genomic: TCTTGGAGCTGCTATCATCT-TCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGG-ACCGTTCATTGGAGCTGCTCTTG
EST: gi|30297733|gb|CB974527.1|CB974527
EST:     GTCTTGGAGCTGCTATCATCTTCANCAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|33405545|gb|CF211172.1|CF211172
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110694875|gb|EE072252.1|EE072252
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCCTTCATTGGA
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGA
EST: gi|352782772|gb|FQ476852.1|FQ476852
EST:     GTCTTGGAGCTGTTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|349826347|gb|FQ417844.1|FQ417844
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTG
EST: gi|110702920|gb|EE079315.1|EE079315
EST:     GTCTTGGAGCTGCTATCATCTTCCACAGAGAGCACGCATGGGATGACATG                         TGGATCTTCTGGGGTGGGACC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGG-TGGGACC
EST: gi|34550552|gb|CF518770.1|CF518770
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCGA-GTA
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCC-ATGTA
EST: gi|30303077|gb|CB979871.1|CB979871
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGA
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGA
EST: gi|110368535|gb|EC932517.1|EC932517
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTT
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTT
EST: gi|352787069|gb|FQ476102.1|FQ476102
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATTTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|51051358|gb|CO819016.1|CO819016
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110366955|gb|EC930875.1|EC930875
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|352791120|gb|FQ477447.1|FQ477447
EST:     GTCTGGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGTTCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|34546194|gb|CF514426.1|CF514426
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|34546877|gb|CF515109.1|CF515109
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110391040|gb|EC955992.1|EC955992
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110366989|gb|EC930909.1|EC930909
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110406888|gb|EC972475.1|EC972475
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACC
EST: gi|111125115|gb|EE253733.1|EE253733
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|352782552|gb|FQ476632.1|FQ476632
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110372188|gb|EC936338.1|EC936338
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGC
EST: gi|110697955|gb|EE075413.1|EE075413
EST:     GTCTTGGAGCTGCTATCATCTTCNACAGAGAGCATGCATGGGATGACATG                         TGGATCCTCTGGGTG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTG
EST: gi|110363744|gb|EC927355.1|EC927355
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110408286|gb|EC973919.1|EC973919
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCCTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|110403569|gb|EC969179.1|EC969179
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTA
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTA
EST: gi|111125045|gb|EE253670.1|EE253670
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|351017174|gb|FQ424601.1|FQ424601
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACTTG                         TGGATCTTCTGGG
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGG
EST: gi|110365973|gb|EC929563.1|EC929563
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
EST: gi|352789705|gb|FQ476303.1|FQ476303
EST:     GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATG                         TGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC
genomic: GTCTTGGAGCTGCTATCATCTTCAACAGAGAGCATGCATGGGATGACATGgtaggtgttt ... ttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTAC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT
                               tgactttttttctctt  CT-rich tract
                                 acttttttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaggtgttttgatgagaaaaaaaaaaaaaaacctaaggaattttgcatcctttgatggttaaattgagtttcagttcaagttcttattgtgactttttttctcttgctttcagTGGATCTTCTGGGTGGGACCGTTCATTGGAGCTGCTCTTGCTGCCATGTACCAGCAGATAGTCATCAGAGCCATTCCATTCAAGAGCAGGGCTTGAGATT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GAGCAG