Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...ttgcatgccaaattgattataattttgctgttagtcttcttagcctaaaataatctttgtagataccggatataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC

Basic information

species Vitis vinifera
transcript Vv19s0015g01190.t01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os04g57220.1 (Oryza sativa), 3'ss of exon 2
----ttgcatgccaaattgattataattttgctgttagtc--ttcttagcctaaaataatctttgtagataccggatataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
     |  ||    |||   ||   |  ||  |   | |    |||  | | |||||    |||    ||  ||    |  | |  | ||||    |||||   ||| ||||| ||||| ||||||||||| |||||||| ||||||||||| ||    |||||||| || ||||| || || ||  |||||  ||| || |||||
cctgcttaatcttgaatcactttctacattatttaaactgaactctatgtccaaaatttgttttactcatctcg----tgctgactacttttg--tctgttgtcagGTCCTGTGGGTGAGGACATGTTCCATTGGCAAGCTACTATTATGGGACCCTCAGACAGCCCATTTGCTGGTGGGGTATTCTTGGTGAACATTCATTTCCC

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA10G18310.1 (Glycine max), 3'ss of exon 2
ttgcatgccaaattgattataattttgctgttagtcttcttagcctaaaataatctttgtagataccggatataattaaaatttttaaacctgttt----atagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
    ||   ||| ||   |  | | ||   |      | ||| | |  | | || | | ||      |  ||| || ||  || |  |  |  ||      ||||||||||||||||||||||||| || |||||||| || ||||||||||||| |||||| ||||  ||||| ||||| || |||||| |||| ||||||||
----atataaaaatggaaaacaatatgtaatattgaatattaccttgtagttatgtatctatgggaagcttatcatgaatcttatgtattccattcttgagtagGCCCTGTTGGTGATGACATGTTTCATTGGCAAGCTACAATTATGGGTCCAACTGACAGTCCTTATGCTGGTGGTGTATTCCTGGTGACCATTCACTTCCC

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA16G17740.1 (Glycine max), 3'ss of exon 1
--------ttgcatgccaaattga-ttataattttgctgttagtcttcttagcctaaaataatctttgtagataccggatataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
        || | ||   | | ||   | |||  | || |   |  |   | ||||  | ||  ||||    ||   | |||      |||||||     | | |  ||| || || | | |||| |||||||| |||||||| || |||||||| || |  || ||||| || ||||||||||||||||| ||||| || ||||||||
taaaatgattccttgaggattggaaccacaatgattctatgtttgcttaaaacctatcaaaacttttgagtgtatgagttatgg----aattttt-----tatattcagGTCCAGTGGCTAATGATATGTTCCATTGGCAAGCTACAATTATGGGCCCTATAGATAGCCCATTTGCTGGAGGTGTGTTTCTTGTGTCAATTCACTTCCC

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA16G17800.1 (Glycine max), 3'ss of exon 1
ttgcatgccaaattgattataattttgctgttagtct-tcttagcct--aaaataatctttgt--agataccggat--ataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
 |     ||  | ||||| ||  ||||||   |  || ||  | | |    | |  |||||||  ||  |  | ||  |||||| || ||||||    |||| |  ||||| || | | ||||||||||||| |||||||| || |||||||||||    || ||||| || ||||| ||||||||| | ||||| || ||||||||
-taggaaccctaatgattctatgtttgcttaaaacctatcagaacttttggattgttctttgtttagtcagtgtatgaataattgaatttttta----tgttca--gGCCCAGTGGTTAATGACATGTTCCATTGGCAAGCTACAATTATGGGTCCTGTAGATAGCCCATTTGCTGGCGGTGTGTTTATTGTGTCAATTCACTTCCC

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA08G35600.1 (Glycine max), 3'ss of exon 1
ttgcatgccaaattga--ttataattttgctgttagtcttcttagccta---aaataatctttgtagataccggatataattaa--aatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
    ||   ||| |||  | ||   ||||||   |  ||  ||   | |   || |  ||| |||  |  | |   || | |||   ||||||     | | |  |||||| || | ||||||||||||||| |||||||| || |||||||||||    || || || || ||||||||||| ||||| ||||| || ||||| ||
---aataataaaatgatgtcattcgtttgcttaaaacctgtttgaaccatcgaactgttctctgttcaatcagtgcatgaataattgattttt----ttatattcagGCCCAGTGGCTGATGACATGTTCCATTGGCAAGCTACAATTATGGGTCCTGCAGATAGTCCATTTGCTGGAGGTGTATTTCTTGTGTCAATTCACTTTCC

upper sequence: Vv19s0015g01190.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: AT5G56150.2 (Arabidopsis thaliana), 3'ss of exon 2
---------------------------------------------------------------------------ttgcatgccaaattgattataattttgctgttagtcttcttagcctaaaataatctttgtagataccggatataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
                                                                           ||     |  |||   || ||       ||||  | || ||  ||| ||   |  ||   || ||     || | || ||    ||     ||||  |||| |||   || ||||| |||||||| |||||||||||||| |||||||||   || ||||| || || |||||||||||||| ||  |||| ||||||||
gtgagtgttttaatctatgatatctactgtgaaatttaaagaaccactttgatagattcagtagatgatgtagcattaacctcagaatcagttttaggagaa-tgtttttttttttgtccttaagatacattatgagctatt---tagattttaatgaattggtgatgttattagGTCCTACGGGAGATGATATGTTCCAATGGCAAGCAACTATCATGGGTCCAGCAGATAGCCCGTTTGCCGGAGGTGTGTTTCTTGTTACCATTCACTTCCC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|22010747|gb|BQ795781.1|BQ795781
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|28962130|gb|CB341163.1|CB341163
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110397347|gb|EC963078.1|EC963078
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110397452|gb|EC963192.1|EC963192
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30305733|gb|CB982527.1|CB982527
EST:     CAAGGAGTTGAAGGTCCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|18458569|gb|BM436847.1|BM436847
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30304918|gb|CB981712.1|CB981712
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|28966983|gb|CB346016.1|CB346016
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110424378|gb|EC990737.1|EC990737
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110718424|gb|EE095241.1|EE095241
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30132111|gb|CB917450.1|CB917450
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|22011709|gb|BQ796743.1|BQ796743
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|27586838|gb|CB009533.1|CB009533
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30325577|gb|CD008839.1|CD008839
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|77579270|gb|DV218463.1|DV218463
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30326464|gb|CD009726.1|CD009726
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110724706|gb|EE100768.1|EE100768
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110716572|gb|EE091681.1|EE091681
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110367321|gb|EC931251.1|EC931251
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|26261823|gb|CA812886.1|CA812886
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30304847|gb|CB981641.1|CB981641
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|22012426|gb|BQ797460.1|BQ797460
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30303600|gb|CB980394.1|CB980394
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|28969210|gb|CB348243.1|CB348243
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAGGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30305660|gb|CB982454.1|CB982454
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110398331|gb|EC964618.1|EC964618
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110357711|gb|EC921395.1|EC921395
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30132272|gb|CB917611.1|CB917611
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|26256846|gb|CA807909.1|CA807909
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71882028|gb|DT031083.1|DT031083
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110425028|gb|EC991403.1|EC991403
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|22012427|gb|BQ797461.1|BQ797461
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30125737|gb|CB911076.1|CB911076
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110397772|gb|EC963658.1|EC963658
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|18458592|gb|BM436870.1|BM436870
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|33408306|gb|CF213933.1|CF213933
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110717724|gb|EE093841.1|EE093841
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110363395|gb|EC926978.1|EC926978
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71888938|gb|DT037993.1|DT037993
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30299508|gb|CB976302.1|CB976302
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110732574|gb|EE107981.1|EE107981
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71881592|gb|DT030647.1|DT030647
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|26257517|gb|CA808580.1|CA808580
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|27582220|gb|CB004915.1|CB004915
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110379386|gb|EC944575.1|EC944575
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30131459|gb|CB916798.1|CB916798
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|26257247|gb|CA808310.1|CA808310
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|33406943|gb|CF212570.1|CF212570
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|34548951|gb|CF517183.1|CF517183
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|33406857|gb|CF212484.1|CF212484
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71890103|gb|DT039158.1|DT039158
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30300456|gb|CB977250.1|CB977250
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|26261501|gb|CA812564.1|CA812564
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71883658|gb|DT032713.1|DT032713
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|22010748|gb|BQ795782.1|BQ795782
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30299771|gb|CB976565.1|CB976565
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30303661|gb|CB980455.1|CB980455
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71883580|gb|DT032635.1|DT032635
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110411130|gb|EC976832.1|EC976832
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30129132|gb|CB914471.1|CB914471
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|28961509|gb|CB340762.1|CB340762
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110359545|gb|EC921209.1|EC921209
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|29782648|gb|CB348159.2|CB348159
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAGGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|32271408|gb|CD720567.1|CD720567
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|22011991|gb|BQ797025.1|BQ797025
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71869064|gb|DT018119.1|DT018119
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30324284|gb|CD007546.1|CD007546
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|29783467|gb|CB349632.2|CB349632
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30300176|gb|CB976970.1|CB976970
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110402516|gb|EC960316.1|EC960316
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|34548858|gb|CF517090.1|CF517090
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110689861|gb|EE066456.1|EE066456
EST:     CTCCCACTTCTTGCACTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|32270308|gb|CD719467.1|CD719467
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110425346|gb|EC991730.1|EC991730
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110723131|gb|EE100089.1|EE100089
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|71890767|gb|DT039822.1|DT039822
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110425426|gb|EC991811.1|EC991811
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110722789|gb|EE099363.1|EE099363
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110362457|gb|EC925993.1|EC925993
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|32245796|gb|CD711615.1|CD711615
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|33404254|gb|CF209881.1|CF209881
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTCGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|32270399|gb|CD719558.1|CD719558
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|27581939|gb|CB004634.1|CB004634
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|30327346|gb|CD010608.1|CD010608
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|29783510|gb|CB349712.2|CB349712
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|46910472|gb|CN545847.1|CN545847
EST:     GCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: GCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
EST: gi|110721366|gb|EE098284.1|EE098284
EST:     CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTG                         GTCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA
genomic: CAAGGAGTTGAAGGACCTGCAGAAGGACCCTCCCACTTCTTGCAGTGCTGgtttgtttct ... ctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

taaaataatctttgtagataccggatataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC
 gcctaaa  putative branch site (score: 3)
                                            cctgttt  putative PPT
                        atataattaaaatttt  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ttgcatgccaaattgattataattttgctgttagtcttcttagcctaaaataatctttgtagataccggatataattaaaatttttaaacctgtttatagGCCCTGTTGGTGATGACATGTTCCACTGGCAAGCAACTATTATGGGTCCAAGTGACAGCCCTTTCGCTGGAGGTGTGTTTCTGGTGTCCATCCACTTCCC

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGG
- -catgcca
- - - - - - - - - - - - -tgctgtt
- - - - - - - - - - - - - - - - - - - - - - - aaaataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aattaaa