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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagtcatctcaatggtaattgatttctgagatttccttgatcaaattttgatttcaatttacataattatcctttggattttttgtatggattttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT

Basic information

species Vitis vinifera
transcript Vv17s0000g01520.t01
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351030711|gb|FQ438549.1|FQ438549
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351024524|gb|FQ426333.1|FQ426333
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351031344|gb|FQ445369.1|FQ445369
EST:     CCGCAACCCTAGCAGCAGTAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77582780|gb|DV220375.1|DV220375
EST:     GCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351047966|gb|FQ441138.1|FQ441138
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351016634|gb|FQ424061.1|FQ424061
EST:     GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351039957|gb|FQ464995.1|FQ464995
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|161720709|gb|FC069946.1|FC069946
EST:     GCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77587950|gb|DV223178.1|DV223178
EST:     GCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351049562|gb|FQ429184.1|FQ429184
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349824564|gb|FQ413231.1|FQ413231
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71871988|gb|DT021043.1|DT021043
EST:     CCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110731046|gb|EE108818.1|EE108818
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349808772|gb|FQ406622.1|FQ406622
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77582784|gb|DV220376.1|DV220376
EST:     GCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|18458130|gb|BM436408.1|BM436408
EST:     GAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351020386|gb|FQ445993.1|FQ445993
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351054774|gb|FQ462804.1|FQ462804
EST:     CCGAAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351022872|gb|FQ428781.1|FQ428781
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77588492|gb|DV223460.1|DV223460
EST:     CTAGCAGCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110703455|gb|EE080326.1|EE080326
EST:     CAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351022865|gb|FQ428774.1|FQ428774
EST:     CCGCAACCCTAGCAGCAGTAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351022452|gb|FQ445227.1|FQ445227
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAGTCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351025356|gb|FQ434369.1|FQ434369
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351036746|gb|FQ457459.1|FQ457459
EST:     CCGAAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110385917|gb|EC950477.1|EC950477
EST:     GTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77588614|gb|DV223519.1|DV223519
EST:     AGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110710201|gb|EE086327.1|EE086327
EST:     CAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77584348|gb|DV221246.1|DV221246
EST:     GCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110374920|gb|EC939863.1|EC939863
EST:     GCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|352791032|gb|FQ480025.1|FQ480025
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110685102|gb|EE063137.1|EE063137
EST:     AGCTGTACCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351031039|gb|FQ444866.1|FQ444866
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110731731|gb|EE106397.1|EE106397
EST:     AGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: AGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351013444|gb|FQ425475.1|FQ425475
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110377700|gb|EC942780.1|EC942780
EST:     AGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351014147|gb|FQ434736.1|FQ434736
EST:     CCGAAACCCTAGCAGCAGGATCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349822753|gb|FQ398140.1|FQ398140
EST:     GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTGGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71868858|gb|DT017913.1|DT017913
EST:     GCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351016310|gb|FQ446170.1|FQ446170
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349830630|gb|FQ416928.1|FQ416928
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|30298202|gb|CB974996.1|CB974996
EST:     CTAGCAGCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110387597|gb|EC952278.1|EC952278
EST:     AGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351021911|gb|FQ437698.1|FQ437698
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77582608|gb|DV220291.1|DV220291
EST:     GCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351027970|gb|FQ425871.1|FQ425871
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110373579|gb|EC937828.1|EC937828
EST:     GAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349829646|gb|FQ421164.1|FQ421164
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351013483|gb|FQ425514.1|FQ425514
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71873861|gb|DT022916.1|DT022916
EST:     GGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351015218|gb|FQ445502.1|FQ445502
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349812938|gb|FQ411178.1|FQ411178
EST:     CCGAAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351014530|gb|FQ437532.1|FQ437532
EST:     CCGCAACCCTAGCAGCCGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110693521|gb|EE069835.1|EE069835
EST:     CCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349832827|gb|FQ422949.1|FQ422949
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71868636|gb|DT017691.1|DT017691
EST:     CAGCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351038668|gb|FQ464534.1|FQ464534
EST:     GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351033545|gb|FQ447704.1|FQ447704
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110708348|gb|EE085789.1|EE085789
EST:     GAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349832874|gb|FQ422996.1|FQ422996
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349816010|gb|FQ403577.1|FQ403577
EST:     CCGAAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349812475|gb|FQ407094.1|FQ407094
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349828548|gb|FQ417290.1|FQ417290
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110378435|gb|EC943567.1|EC943567
EST:     AGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|37188942|gb|CF608291.1|CF608291
EST:     AGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71872768|gb|DT021823.1|DT021823
EST:     GCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351023668|gb|FQ448219.1|FQ448219
EST:     GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71871695|gb|DT020750.1|DT020750
EST:     CTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351044256|gb|FQ447610.1|FQ447610
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351047426|gb|FQ451938.1|FQ451938
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349826254|gb|FQ416059.1|FQ416059
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110694166|gb|EE071033.1|EE071033
EST:     GAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110405724|gb|EC971271.1|EC971271
EST:     AGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: AGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351030281|gb|FQ432219.1|FQ432219
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351049089|gb|FQ431633.1|FQ431633
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|51990012|gb|CV179467.1|CV179467
EST:     CTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349819836|gb|FQ404582.1|FQ404582
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|349829070|gb|FQ419602.1|FQ419602
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351039332|gb|FQ461199.1|FQ461199
EST:     AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351025483|gb|FQ435175.1|FQ435175
EST:     CCGAAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351029385|gb|FQ436779.1|FQ436779
EST:     CGCAACCCTAGCAGCAGGTGTCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CGCAACCCTAGCAGCAGGAG-CAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351043007|gb|FQ434448.1|FQ434448
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110377244|gb|EC942306.1|EC942306
EST:     GAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77579342|gb|DV218499.1|DV218499
EST:     CCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGTAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: CCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|30124980|gb|CB910319.1|CB910319
EST:     GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110410598|gb|EC976286.1|EC976286
EST:     GAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: GAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77582985|gb|DV220508.1|DV220508
EST:     GAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|77581217|gb|DV219537.1|DV219537
EST:     GCAGGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|71867984|gb|DT017039.1|DT017039
EST:     GGAGCAGGAGAAGAAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: GGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|110693946|gb|EE070624.1|EE070624
EST:     AAGCTGTAGCAGCAGCCATG                         GTGAAGTATTCGAGAGAACCAGACAATCCCACCAAGT
genomic: AAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
EST: gi|351040963|gb|FQ443739.1|FQ443739
EST:     CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCGTG                         GTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
genomic: CCGCAACCCTAGCAGCAGGAGCAGAAGAAGAAGCTGTAGCAGCAGCCATGgtgagtcatc ... attttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttgatttcaatttacataattatcctttggattttttgtatggattttttcagGTGAAGTATTCGAGAGAACCAGACAATCCTACCAAGT
 ttttgat  putative branch site (score: 4)
                                              ttttttc  putative PPT
     atttcaatttacataa  TA-rich tract