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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtagttatactttcctaacaccattagattttactccttgtttgctcactagcttgtgacaaagactaacttgttggtctttattattgcagGAATATGTAATGAGAGCACTATCAGGGAAGACAGTCCTACTTGTGACCCACCAAGTTGATTTTCTTCCTGCTTTTGGTTCTGTTTTG

Basic information

species Vitis vinifera
transcript Vv16s0050g02280.t01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgtttgctcactagcttgtgacaaagactaacttgttggtctttattattgcagGAATATGTAATGAGAGCACTATCAGGGAAGACAGTCCTACTTGTGACCCACCAAGTTGATTTTCTTCCTGCTTTTGGTTCTGTTTTG
                          gactaac  putative branch site (score: 1)
                                        tctttatt  putative PPT
                                        tctttattatt  TA-rich tract