Sequence
atgc intronic sequence ATGC exonic sequence...cttcaaacctgctatttatttcaacaaggtcttctatttcaatattcttttatgaacagataattttagaagtgcttctaactatgattccttgttttagAAAATAAATCTCCCTAA
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.tcttttatgaacagataattttagaagtgcttctaactatgattccttgttttagAAAATAAATCTCCCTAA
ttctaac putative branch site (score: 1)
ttccttgtttt putative PPT
aacagataatttta TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
cttcaaacctgctatttatttcaacaaggtcttctatttcaatattcttttatgaacagataattttagaagtgcttctaactatgattccttgttttagAAAATAAATCTCCCTAA
- -caaacct
- - - - - - - - - - - aacaagg
- - - - - - - - - - - - - - - - - - - - - - - - - - -gaacaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcttct