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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tctgaaaatttgtttagctctgaatttttgttatctccttttttattctagttcctttgttatgataatggtgttaaatatgtattttattgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGATCATCGCCGTAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGA

Basic information

species Vitis vinifera
transcript Vv13s0047g01160.t01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv13s0047g01160.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G145280_T01 (Zea mays), 3'ss of exon 3
-tctgaa--aatttgtttagctctgaatttttgttatctccttttttattctagttcctttgttatgataatggtgttaaatatgtattttattgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGATCATCGCCGTAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGA
 |||| |   ||   | | |   |   || || | |    |  ||||  || |    || |||||| ||  || || ||||  | || | | |||||  | |||| || |||||||||||||| || ||||||||||| || || || |||||||| ||||| ||||||   || || ||| | || || || ||||||||||
ttctgcatttatccttgttgaattatcttcttatgagtcacacttttcatcgatgatctgtgttat-atcttgatgctaaaagt-tactatgttgattgc-agGCTGCTGGCATCCCAAAGAAGCTTGCTCCAACCATTGGTATTTCTGTTGATCACCGCCGCAAGAACAAATCCCTTGAGGGACTGCAGGCCAATGTCCAGA

upper sequence: Vv13s0047g01160.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: AT5G23900.1 (Arabidopsis thaliana), 3'ss of exon 3
tctgaaaatttgtttagctctgaatttttgttatctccttttttattctagttcctttgttatgataatggtgttaaatatgtatttt-attgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGATCATCGCCGTAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGA
  |    |||  |  |  | | ||| ||     | | || | ||  | ||| |  |  | |   |       |||   |   | ||||  ||  |    |||  || || |||||||||||  |||||||||| ||||| || || |||||||| || || |||||||||||| | ||| | |||||  | |||||||| |
-gtttggattcttgaatttttcaatgttctaagtgttctctctt--tatagatattaagatgaaagctcatagttgcttgcttctttttgtttttttttagGTTGCTGGTATCCCAAAGAAGTTGGCTCCAACAATCGGAATTTCTGTTGATCACCGACGCAAGAACCGTTCTTTGGAGGGTCTTCAGTCCAATGTCCAAA

upper sequence: Vv13s0047g01160.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: PP1S126_52V6.1 (Physcomitrella patens), 3'ss of exon 3
tctgaaaatttgt-ttagctctgaatttttgttatctcctttt-------ttattctagttcctttgttatgataatggtgttaaatatgtattttattgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGATCATCGCCGTAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGA
       || ||  |||    ||||    | |    ||||||            ||| |   |||  | |   |  || || ||||| || |||   ||    ||||||| || |||||||||||||| || || || |||||||||||  | |||||||||||||||||||| || |   | |||||||||||||  || ||  |  
----gtgatctgcgttacaattgaagggatat-gcatcctttgggcgaagccgctctcgactcttcatgagtttcctgatgataaat-tgaattgcgtt--ccaccagGCTGCTGGCATCCCAAAGAAGCTTGCACCCACCATCGGCATCGCCGTTGATCATCGCCGTAAGAATCGGTGCTTGGAGAGCCTTCAAGAGAACGTTAACC

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|351013912|gb|FQ434064.1|FQ434064
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71868939|gb|DT017994.1|DT017994
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110374653|gb|EC939572.1|EC939572
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|349819009|gb|FQ411704.1|FQ411704
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAACAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110410609|gb|EC976297.1|EC976297
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110402743|gb|EC963344.1|EC963344
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77577487|gb|DV217486.1|DV217486
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77579768|gb|DV218761.1|DV218761
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71875695|gb|DT024750.1|DT024750
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77577311|gb|DV217369.1|DV217369
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77586857|gb|DV222575.1|DV222575
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71871770|gb|DT020825.1|DT020825
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77587612|gb|DV222978.1|DV222978
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|33404164|gb|CF209791.1|CF209791
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77588546|gb|DV223488.1|DV223488
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71871103|gb|DT020158.1|DT020158
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|349826947|gb|FQ419038.1|FQ419038
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|30252827|gb|CB970378.1|CB970378
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71873911|gb|DT022966.1|DT022966
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71872008|gb|DT021063.1|DT021063
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77583971|gb|DV221026.1|DV221026
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71869135|gb|DT018190.1|DT018190
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77577771|gb|DV217631.1|DV217631
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71870356|gb|DT019411.1|DT019411
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71868871|gb|DT017926.1|DT017926
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110390862|gb|EC955799.1|EC955799
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110702982|gb|EE079427.1|EE079427
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71869839|gb|DT018894.1|DT018894
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71865300|gb|DT014355.1|DT014355
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|34545008|gb|CF513240.1|CF513240
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110708242|gb|EE085563.1|EE085563
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|46918011|gb|CN547340.1|CN547340
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110416692|gb|EC982689.1|EC982689
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71868130|gb|DT017185.1|DT017185
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|161720210|gb|FC070862.1|FC070862
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71868819|gb|DT017874.1|DT017874
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110364934|gb|EC928548.1|EC928548
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71867619|gb|DT016674.1|DT016674
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|37189598|gb|CF608947.1|CF608947
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71874395|gb|DT023450.1|DT023450
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71877491|gb|DT026546.1|DT026546
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71872021|gb|DT021076.1|DT021076
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71870620|gb|DT019675.1|DT019675
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77577683|gb|DV217585.1|DV217585
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77585114|gb|DV221644.1|DV221644
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110397665|gb|EC963472.1|EC963472
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71867601|gb|DT016656.1|DT016656
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77585079|gb|DV221625.1|DV221625
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|30251223|gb|CB968956.1|CB968956
EST:     GGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: GGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|34548022|gb|CF516254.1|CF516254
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77581622|gb|DV219759.1|DV219759
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|34416874|gb|CF415628.1|CF415628
EST:     GCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: GCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71866012|gb|DT015067.1|DT015067
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77579410|gb|DV218538.1|DV218538
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71867596|gb|DT016651.1|DT016651
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71868780|gb|DT017835.1|DT017835
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110375521|gb|EC940514.1|EC940514
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71877186|gb|DT026241.1|DT026241
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77588253|gb|DV223337.1|DV223337
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77579137|gb|DV218396.1|DV218396
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110690686|gb|EE068062.1|EE068062
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|161716153|gb|FC064625.1|FC064625
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110730682|gb|EE108038.1|EE108038
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110404442|gb|EC969510.1|EC969510
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110730242|gb|EE107094.1|EE107094
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|34416297|gb|CF415051.1|CF415051
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|349826221|gb|FQ416026.1|FQ416026
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGACTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77588025|gb|DV223227.1|DV223227
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71876187|gb|DT025242.1|DT025242
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110693774|gb|EE070298.1|EE070298
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|352794408|gb|FQ481639.1|FQ481639
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71873762|gb|DT022817.1|DT022817
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110709634|gb|EE085276.1|EE085276
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71871996|gb|DT021051.1|DT021051
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77578196|gb|DV217872.1|DV217872
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71875805|gb|DT024860.1|DT024860
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110386128|gb|EC950703.1|EC950703
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|352790931|gb|FQ477379.1|FQ477379
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|351016154|gb|FQ435474.1|FQ435474
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110691374|gb|EE069404.1|EE069404
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71865835|gb|DT014890.1|DT014890
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77581484|gb|DV219678.1|DV219678
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71865560|gb|DT014615.1|DT014615
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|37190372|gb|CF609721.1|CF609721
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110707804|gb|EE084621.1|EE084621
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110686227|gb|EE063637.1|EE063637
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110391369|gb|EC956338.1|EC956338
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110406563|gb|EC972142.1|EC972142
EST:     CAACAATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: CAAC-ATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110689346|gb|EE065500.1|EE065500
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110413959|gb|EC979778.1|EC979778
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71877028|gb|DT026083.1|DT026083
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77581384|gb|DV219622.1|DV219622
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77583915|gb|DV220997.1|DV220997
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77579394|gb|DV218530.1|DV218530
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71876649|gb|DT025704.1|DT025704
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|30254535|gb|CB971280.1|CB971280
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71867740|gb|DT016795.1|DT016795
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71869214|gb|DT018269.1|DT018269
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71865279|gb|DT014334.1|DT014334
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110376532|gb|EC941595.1|EC941595
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|26261449|gb|CA812512.1|CA812512
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|34319352|gb|CF372106.1|CF372106
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71871104|gb|DT020159.1|DT020159
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|351024697|gb|FQ433112.1|FQ433112
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|32269241|gb|CD718400.1|CD718400
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|30252742|gb|CB970293.1|CB970293
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|351012226|gb|FQ426948.1|FQ426948
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|294964062|gb|GW837865.1|GW837865
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|33404082|gb|CF209709.1|CF209709
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71872061|gb|DT021116.1|DT021116
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|71869109|gb|DT018164.1|DT018164
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|110693668|gb|EE070101.1|EE070101
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
EST: gi|77587181|gb|DV222723.1|DV222723
EST:     ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAG                         GCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT
genomic: ACAACATGAAAGTCAGAGCTGGCAGGGGATTCTCTCTGGAAGAGCTCAAGgtgggaacct ... tgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttctagttcctttgttatgataatggtgttaaatatgtattttattgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGATCATCGCCGTAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGA
                                          tattgat  putative branch site (score: 3)
                                       ttttatt  CT-rich tract
                   ataatggtgttaaata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tctgaaaatttgtttagctctgaatttttgttatctccttttttattctagttcctttgttatgataatggtgttaaatatgtattttattgataaccagGCAGCAGGCATCCCAAAGAAACTGGCTCCAACCATCGGCATATCGGTTGATCATCGCCGTAAGAACCGTTCTCTAGAGAGCCTTCAAGCAAATGTCCAGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGCAA
- -gaaaatt
- - - - - - - - -ctctgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tggtgtt