Skip to another splice site:
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgattttattttttgtgttattgctttttcttgatcttggatttttttttatttgtttggttgtgatggagagatgattatggttttgattggcttgtttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG

Basic information

species Vitis vinifera
transcript Vv09s0002g06000.t01
intron # 2
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|110383499|gb|EC947874.1|EC947874
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|71869211|gb|DT018266.1|DT018266
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|37184968|gb|CF604321.1|CF604321
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110710069|gb|EE086082.1|EE086082
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110416472|gb|EC982456.1|EC982456
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110372596|gb|EC936778.1|EC936778
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|77583916|gb|DV220998.1|DV220998
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110729376|gb|EE105272.1|EE105272
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|30130611|gb|CB915950.1|CB915950
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110409652|gb|EC975320.1|EC975320
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110391356|gb|EC956324.1|EC956324
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTTTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110732279|gb|EE107427.1|EE107427
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110363963|gb|EC927598.1|EC927598
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|34363406|gb|CF404991.1|CF404991
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGCCATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110388157|gb|EC952876.1|EC952876
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|22015288|gb|BQ800322.1|BQ800322
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110379671|gb|EC944884.1|EC944884
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|351023328|gb|FQ432711.1|FQ432711
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110358977|gb|EC919699.1|EC919699
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|34416754|gb|CF415508.1|CF415508
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110388522|gb|EC953282.1|EC953282
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|18458128|gb|BM436406.1|BM436406
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110688079|gb|EE066223.1|EE066223
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|71890751|gb|DT039806.1|DT039806
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|51989643|gb|CV179098.1|CV179098
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAACGCACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110720795|gb|EE097031.1|EE097031
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110686825|gb|EE064905.1|EE064905
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|22011533|gb|BQ796567.1|BQ796567
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|351021701|gb|FQ437086.1|FQ437086
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGATTCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|37188662|gb|CF608011.1|CF608011
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110726657|gb|EE102629.1|EE102629
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|22011530|gb|BQ796564.1|BQ796564
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110697767|gb|EE075131.1|EE075131
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110419881|gb|EC986135.1|EC986135
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110689245|gb|EE065301.1|EE065301
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110383239|gb|EC947598.1|EC947598
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|351028470|gb|FQ444751.1|FQ444751
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110383358|gb|EC947726.1|EC947726
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|37189375|gb|CF608724.1|CF608724
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|351015867|gb|FQ431822.1|FQ431822
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110705917|gb|EE083315.1|EE083315
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110704719|gb|EE081713.1|EE081713
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110417183|gb|EC983218.1|EC983218
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|46919594|gb|CN548923.1|CN548923
EST:     GGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: GGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110687315|gb|EE064616.1|EE064616
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110715813|gb|EE094294.1|EE094294
EST:     AAGAACTTGAAGCTGCGCTTGAT                         GGAAAGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: AAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|37187454|gb|CF606807.1|CF606807
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|71890518|gb|DT039573.1|DT039573
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110372495|gb|EC936667.1|EC936667
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|37189413|gb|CF608762.1|CF608762
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAAGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110384407|gb|EC948841.1|EC948841
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|22015168|gb|BQ800202.1|BQ800202
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
EST: gi|110377523|gb|EC942592.1|EC942592
EST:     TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGAT                         GGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
genomic: TGCCTATTGCGACCGGGCATGAGCGTGAAGAACTTGAAGCTGCGCTTGATgtgattttat ... tttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttgtttggttgtgatggagagatgattatggttttgattggcttgtttcatttagGGAAGGGACATTCTGGATGCAGACCATCCTGTTGGTCCGTTTGGTACAAAG
                               ttttgat  putative branch site (score: 4)
                                         cttgtttc  putative PPT
                                             tttcattta  TA-rich tract