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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttaaggcaagttcttcacaaccgcttggccatcttttgctttaaaaattcatgtgctctctttcgcaatttgaagtctgatttataattctcttcagtattttgtctacacagACGGTTCTCAATAGAGTCAATACATTCACAAATATCACTTACAAGGAGGACCCAACAATTTTCGCTTGGGAACTGATGAATGAGCCACGATGTACTTCAG

Basic information

species Vitis vinifera
transcript Vv08s0058g01460.t01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tctttcgcaatttgaagtctgatttataattctcttcagtattttgtctacacagACGGTTCTCAATAGAGTCAATACATTCACAAATATCACTTACAAGGAGGACCCAACAATTTTCGCTTGGGAACTGATGAATGAGCCACGATGTACTTCAG
                gtctgat  putative branch site (score: 4)
                                         ttttgtct  putative PPT
                     atttataattctctt  TA-rich tract