1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...aaaagattagtttggcctgttgtaatggcctggtcatttgaattgccaccttcacaactgtacttttccattgaggttcttttgttatgtatttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATGCCACCTATGTCCCTCACACAGCTGGGAGGTATTCTGTCAAGCGGTTCC
species | Vitis vinifera |
transcript | Vv08s0007g07220.t01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGACGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110397360|gb|EC963092.1|EC963092
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|77585543|gb|DV221862.1|DV221862
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|77587163|gb|DV222711.1|DV222711
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|37187486|gb|CF606839.1|CF606839
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110366734|gb|EC930652.1|EC930652
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110690648|gb|EE067989.1|EE067989
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110381808|gb|EC935439.1|EC935439
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110362066|gb|EC925573.1|EC925573
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110384813|gb|EC949278.1|EC949278
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: CTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110724236|gb|EE099885.1|EE099885
genomic: CTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110727075|gb|EE103444.1|EE103444
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|161709614|gb|FC058007.1|FC058007
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|161719032|gb|FC067652.1|FC067652
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110691236|gb|EE069106.1|EE069106
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110698863|gb|EE076849.1|EE076849
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGATGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|351030727|gb|FQ438565.1|FQ438565
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110378204|gb|EC943323.1|EC943323
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110365695|gb|EC929082.1|EC929082
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|161712010|gb|FC060039.1|FC060039
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGACACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110689077|gb|EE064986.1|EE064986
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110363572|gb|EC927170.1|EC927170
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110730006|gb|EE106594.1|EE106594
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110391483|gb|EC956461.1|EC956461
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: CTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|77579066|gb|DV218359.1|DV218359
genomic: CTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|71870145|gb|DT019200.1|DT019200
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110360526|gb|EC923702.1|EC923702
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: GCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110702525|gb|EE081337.1|EE081337
genomic: GCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110729763|gb|EE106071.1|EE106071
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110701952|gb|EE080108.1|EE080108
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|71855366|gb|DT004421.1|DT004421
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|161712064|gb|FC061436.1|FC061436
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|37190649|gb|CF609998.1|CF609998
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110714778|gb|EE092075.1|EE092075
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|351019313|gb|FQ429473.1|FQ429473
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|22014248|gb|BQ799282.1|BQ799282
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: CGCTGGAGC-TTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTTGCTGTGAATCCAGCCAAGCAEST: gi|110717318|gb|EE093071.1|EE093071
genomic: CGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACA-TTGCTGTGAATCCAGCCAAGCA
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110414140|gb|EC979966.1|EC979966
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110715709|gb|EE094070.1|EE094070
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110390058|gb|EC954943.1|EC954943
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110410333|gb|EC976014.1|EC976014
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: ACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110724060|gb|EE099555.1|EE099555
genomic: ACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATCTCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|110367197|gb|EC931123.1|EC931123
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|30254126|gb|CB971141.1|CB971141
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: TCAACCGCTGGAGCTTTGACGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATEST: gi|351041459|gb|FQ447586.1|FQ447586
genomic: TCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACCTATCTCTGGAGGACTACATTGCTGTGAATCCAGCCCAGCATEST: gi|110402662|gb|EC960696.1|EC960696
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
EST: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAG ATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
genomic: AGGAGACGACTGTGAAGCTCTTCAACCGCTGGAGCTTTGATGAAGTGCAGgtttcaatct ... atttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCAT
ccaccttcacaactgtacttttccattgaggttcttttgttatgtatttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATGCCACCTATGTCCCTCACACAGCTGGGAGGTATTCTGTCAAGCGGTTCC
ttttgttatgtattt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| aaaagattagtttggcctgttgtaatggcctggtcatttgaattgccaccttcacaactgtacttttccattgaggttcttttgttatgtatttgcacagATTTCTGACATATCTCTGGAGGACTACATTGCTGTGAATCCAGCCAAGCATGCCACCTATGTCCCTCACACAGCTGGGAGGTATTCTGTCAAGCGGTTCC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
aaaagat
- - - - - - - -cctgttg
- - - - - - - - - - - - - ggcctgg
- - - - - - - - - - - - - - - - - - - - - - -ccacctt