Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA

Basic information

species Vitis vinifera
transcript Vv08s0007g02580.t01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G027378_T01 (Zea mays), 3'ss of exon 2
----tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
    |||  |    | ||  |     |  || ||     | || ||  | ||    ||| || || |   |      ||   |  |  | ||  | ||| ||||||||||||||| |||||||| || ||| ||||| |||| ||||||||||| ||||| ||||||||||||  |||| | || || ||| | ||||||||||
tctgtagg-tcttctctaacaacagcgcagtcttttccatagagttacttct--cttggctatctaatttgttt-ccacgtccaacaacatttctctttgtcagACTGTACATGAGGGTCGCATCTACCAGCTGAAGTTGTTTTGTGACAAAGACTATCCGGAGAAGCCACCATCTGTCAGATTCCACTCAAGAATCAACATGA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G071010_T01 (Zea mays), 3'ss of exon 2
tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
|     |   |   |||        |  ||   ||        |||||  | | |      ||          ||   |  |  | ||  | ||| ||||||||||||||| |||||||| || ||| ||||| |||| |||||||| || ||||| ||||||||||||  |||| | || || ||| | ||||||||||
tctgtaggtcttctctaacaacagcgcattcttttccatagagttgcttctcttggctatctaatttatttccacgtcccacaacatttctctttgtcagACTGTACATGAGGGTCGCATCTACCAGCTGAAGTTGTTTTGTGACAAGGACTATCCGGAGAAGCCACCATCTGTCAGATTCCACTCAAGAATCAACATGA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA02G35990.1 (Glycine max), 3'ss of exon 2
tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcac----attacaatcttctcctttattttttttc----agACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
          | || || |||    | |||   ||||   || | | | | |  |   | || ||    |    |||    |||| || ||||| |||| ||    ||||||||||||||||  | || |||||  |||||||||| ||||| ||||| || ||||| ||||| || ||||| || ||||||||||||||||||||||
------atcttttaataatgtacttgctttcattttt--tttatagttaaaaaagtctgtttgcagatcctataattgtgttcttttcatttatcttttctctgtcagACTGTACATGAAGGAAGAATTTATCAACTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCTAGTGTTCGGTTTCATTCACGGATCAACATGA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA10G09280.2 (Glycine max), 3'ss of exon 2
--tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
  |   ||  |   |  | ||| |    |||||  | |||  |    ||     || | | | || ||     ||    || |||   |  || | | ||||||||||||||||||  | || ||||| ||||||||||| ||||| ||||| || ||||| ||||| |||||||| || |||||||||||  |||||||||
tcttttatatataatgttcttgcttgcattttgtttgttg-ttaaaagcctgcttgcagatcctataattgtgttcttctcatctatctc-ttctctgtcagACTGTACATGAAGGAAGAATTTATCAATTGAAGCTGTTTTGTGATAAAGACTACCCAGAAAAGCCCCCAAGTGTTCGGTTTCATTCACGAGTCAACATGA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA03G26580.1 (Glycine max), 3'ss of exon 1
---tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
   || ||   ||||||||    || |  ||||     || |      |    | || | | | || ||     |||   || | |   || || | | |||| |||||||||||||  | || |||||  ||||| |||| ||||| ||||| || ||||| ||| | || ||||| || ||||||||||||||||||||||
atatataaaataatgtacttgctttcatttttttatagttaaaaaa--gtctgtttgcagatcctataattgtgttattctcatttatctt-ttctctgtcagGCTGTACATGAAGGAAGAATTTATCAACTGAAGTTGTTTTGTGATAAAGACTACCCAGAAAAGTCCCCTAGTGTTCGGTTTCATTCACGGATCAACATGA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: EFJ15952 (Selaginella moellendorffii), 3'ss of exon 2
tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaag--cacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
                   ||     || |   ||||   |  |||||  ||       || ||     | | ||    | ||||| |||||| | |  ||| |||| || ||||| ||||| |||||| | ||| ||| ||| |||||||| ||||| || |||||||||||||| || || ||||| || ||||||||||
-------------------gtcctctttcttttttttctttctttgctcttacaatgcactgactctttcgctttttttttttctcatttattctgtg-cagTCTGTTCACGAAGGACGCATTTATCAGCTTAAGTTGTACTGCGACAAAGACTATCCGGATAAGCCACCAAGTGTGCGATTCCATTCGCGAATCAACATGA

upper sequence: Vv08s0007g02580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: EFJ33318 (Selaginella moellendorffii), 3'ss of exon 2
tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
                   ||     || |   ||||   |  |||||  |||      || ||     |  |    | ||||| |||||| | |  ||| |||| || ||||| ||||| |||||  | ||| ||| ||| |||||||| ||||| || |||||||||||||| || || ||||| || ||||||||||
-------------------gtcctctttcttttttttctttctttgctcttataatgccctgactctttcgctttt-ttttctcatttattctgtg-cagTCTGTTCACGAAGGACGCATTTATCAACTTAAGTTGTACTGCGACAAAGACTATCCGGATAAGCCACCAAGTGTGCGATTCCATTCGCGAATCAACATGA

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27586596|gb|CB009291.1|CB009291
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32271925|gb|CD721084.1|CD721084
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110707841|gb|EE084698.1|EE084698
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110375474|gb|EC940462.1|EC940462
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|87584965|gb|DY473918.1|DY473918
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110732951|gb|EE108687.1|EE108687
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|349822453|gb|FQ412717.1|FQ412717
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|26258536|gb|CA809599.1|CA809599
EST:     ATGACATTTATATGCGCTCTTGGGCTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110714378|gb|EE091219.1|EE091219
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110724375|gb|EE100150.1|EE100150
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351038696|gb|FQ464562.1|FQ464562
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|37183510|gb|CF602864.1|CF602864
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32270788|gb|CD719947.1|CD719947
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|27583675|gb|CB006370.1|CB006370
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110687069|gb|EE064159.1|EE064159
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110717388|gb|EE093211.1|EE093211
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110730308|gb|EE107240.1|EE107240
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|28968921|gb|CB347954.1|CB347954
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351019361|gb|FQ429523.1|FQ429523
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|349829575|gb|FQ421093.1|FQ421093
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32271546|gb|CD720705.1|CD720705
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110732231|gb|EE107337.1|EE107337
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110384897|gb|EC949365.1|EC949365
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|46917735|gb|CN547064.1|CN547064
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|349810098|gb|FQ401544.1|FQ401544
EST:     ATGACGTTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|83274982|gb|DV939078.1|DV939078
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110709713|gb|EE085412.1|EE085412
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110394930|gb|EC960357.1|EC960357
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110707782|gb|EE084575.1|EE084575
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110425147|gb|EC991525.1|EC991525
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110694527|gb|EE071709.1|EE071709
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351027465|gb|FQ444714.1|FQ444714
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110700471|gb|EE078547.1|EE078547
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|71880853|gb|DT029908.1|DT029908
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110427088|gb|EC993519.1|EC993519
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110390632|gb|EC955552.1|EC955552
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30126250|gb|CB911589.1|CB911589
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|18459279|gb|BM437557.1|BM437557
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|34319675|gb|CF372429.1|CF372429
EST:     ATGACATTTATATGCGCTCTTGGTCTGGCTCCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110714562|gb|EE091611.1|EE091611
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110410337|gb|EC976018.1|EC976018
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30326581|gb|CD009843.1|CD009843
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110360971|gb|EC924417.1|EC924417
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110733131|gb|EE109052.1|EE109052
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|77580127|gb|DV218959.1|DV218959
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30322852|gb|CD006114.1|CD006114
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|71872066|gb|DT021121.1|DT021121
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110724044|gb|EE099525.1|EE099525
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|27582163|gb|CB004858.1|CB004858
EST:     ATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|18458325|gb|BM436603.1|BM436603
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351022026|gb|FQ437813.1|FQ437813
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|28969001|gb|CB348034.1|CB348034
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32271584|gb|CD720743.1|CD720743
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110710620|gb|EE087153.1|EE087153
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351031308|gb|FQ445333.1|FQ445333
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|349830651|gb|FQ416949.1|FQ416949
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30251839|gb|CB969572.1|CB969572
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|27584334|gb|CB007029.1|CB007029
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110397673|gb|EC963488.1|EC963488
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|34320462|gb|CF373216.1|CF373216
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110714642|gb|EE091779.1|EE091779
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110708726|gb|EE086599.1|EE086599
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30323632|gb|CD006894.1|CD006894
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110722674|gb|EE099112.1|EE099112
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32272487|gb|CD721646.1|CD721646
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30328344|gb|CD011606.1|CD011606
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCT
EST: gi|32249430|gb|CD715249.1|CD715249
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110420507|gb|EC986781.1|EC986781
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110724748|gb|EE100845.1|EE100845
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|71870381|gb|DT019436.1|DT019436
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110723215|gb|EE100269.1|EE100269
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|71879441|gb|DT028496.1|DT028496
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCATTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351028883|gb|FQ434884.1|FQ434884
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110413325|gb|EC979104.1|EC979104
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|161713525|gb|FC063126.1|FC063126
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30134219|gb|CB919557.1|CB919557
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110373778|gb|EC938122.1|EC938122
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32269247|gb|CD718406.1|CD718406
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32248493|gb|CD714312.1|CD714312
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110717766|gb|EE093911.1|EE093911
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32247778|gb|CD713597.1|CD713597
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110374794|gb|EC939726.1|EC939726
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351022650|gb|FQ428559.1|FQ428559
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32245976|gb|CD711795.1|CD711795
EST:     ATGACATTTATATGCGCTGTTGGAGTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|22010006|gb|BQ795040.1|BQ795040
EST:     ATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110703986|gb|EE081402.1|EE081402
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110733055|gb|EE108882.1|EE108882
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|26257778|gb|CA808841.1|CA808841
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|32268908|gb|CD718067.1|CD718067
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|30127863|gb|CB913202.1|CB913202
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|349823964|gb|FQ417351.1|FQ417351
EST:     ATGACATTTATATGCGCCCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110422900|gb|EC989234.1|EC989234
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|46917736|gb|CN547065.1|CN547065
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110703067|gb|EE079588.1|EE079588
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110697815|gb|EE075221.1|EE075221
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|110695767|gb|EE074160.1|EE074160
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|351040256|gb|FQ425342.1|FQ425342
EST:     ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAAT                         ACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
EST: gi|26265421|gb|CA816484.1|CA816484
EST:     ATGACATTTATATACGCTCTTGGACTGGCACCATCGTCGGTCCTCATAAT                         ACTGTACATGAGGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT
genomic: ATGACATTTATATGCGCTCTTGGACTGGCACCATCATCGGTCCTCATAATgtaagtgccc ... tttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA
            agcttac  putative branch site (score: 3)
                          ttacaatcttctcctt  putative PPT
                                        tttattttttttca  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tagaatgaaatgtactattgttgaggttttggattttgacttcttgctgatatggatagcttacaagcacattacaatcttctcctttattttttttcagACTGTACATGAAGGTCGCATATATCAGTTGAAGCTGTTCTGTGACAAAGATTATCCAGAGAAGCCACCAAGTGTCCGTTTTCATTCACGGATCAACATGA

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- -aatgaaa
- - - - - - - - - - - - - - - - - - - - ttcttgc
- - - - - - - - - - - - - - - - - - - - - - - - - - tggatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - acaagca