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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG

Basic information

species Vitis vinifera
transcript Vv04s0044g00580.t01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os01g73310.1 (Oryza sativa), 3'ss of exon 1
-----atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaag-cagcaaaacttaaactttgttatactttgtcccctgacttcatatttctc--atgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
      |  | |||  ||    |   || |   || | |||     |||  |  |   |||    |||  |  ||    | | |   || | ||||| |     | |  |    |    ||||| ||   ||| ||||||||||| || |||||||||||||| ||||||||||| |||
agcacctcaagatttcctctgcacagtata---gtaactatcgaaaaagatattatttctttgtttttaattgacaaccttcacgtgctacttatttttgcagAGTAAATCTATAGGAAATGGCTGACGGTGAGGATATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os10g36650.1 (Oryza sativa), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatat-ttgtcaagcagcaaaacttaaactttgtta-tactttgtcccctgacttcatatttctcatgcagGTAA--TAAAA-GGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
   |   || |  ||  ||  |  |        ||  || |   | |  ||    ||  |||||| |  ||| | |    ||| ||  | | | | |||||| | |  |||||   ||||| ||  | || || || |||||||| ||||||||||||||||| |||||||| |||
--tgtttttgtaggatgaatgtttagttcaagttacatttttctgtattaatctatagtctttgtaaacactgttttgaatgatttattttgtgttatgcagATCAGTTAAAATAAATGGCTGACGCAGAGGACATTCAGCCCCTTGTCTGTGACAATGGAACCGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os05g01600.2 (Oryza sativa), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatact-ttgtcccctgacttcatatttctcatgcagGTAATA---AAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
            |||   || | || |  ||  |  | ||| ||  | | | |   ||   |     |||  |      | |  |  ||  |||| ||||| |  |    |    ||||| ||   ||| || |||||||| || |||||||||||||| ||||||||||| |||
-----------atgatttagttgaagaaatgcgtcgtcgtcgagttgtatagcaacaatgatcaggcactactacttgttaaagtattaactctc-tgcagctcttctgtagGAAATGGCTGACGGTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os05g01600.1 (Oryza sativa), 3'ss of exon 1
atggaaattatc--tgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatact-ttgtcccctgacttcatatttctcatgcagGTAAT---AAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
   | | | |||  |||   || | || |  ||  |  | ||| ||  | | | |   ||   |     |||  |      | |  |  ||  |||| ||||| |  |    |    ||||| ||   ||| || |||||||| || |||||||||||||| ||||||||||| |||
--agtactcatcaatgatttagttgaagaaatgcgtcgtcgtcgagttgtatagcaacaatgatcaggcactactacttgttaaagtattaactctc-tgcagCTCTTCTGTAGGAAATGGCTGACGGTGAGGACATCCAGCCTCTTGTCTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os11g06390.6 (Oryza sativa), 3'ss of exon 1
--atggaaattatctgaaaaagctaaaaa-ggtgaatatttgtcaagcagcaaaacttaa-actttgt----tatactttgtcccctgacttcatatttctcatgcagG--TAATAAAAGGA--TGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
  ||    |||  ||| |     |       ||   | || |  ||    ||   | | |    |||      || | |  |   |||  ||    |     || |||    | ||  ||||  |||| ||    || || ||||||||||| || ||||||||||||||||| ||||| |||
agattttgatttcctggagggtttgcgtctagtttctgttggaaaatggccatttcgtgacgtgttgcggcgcatgcctgttgttctgtttttgcgtcagGAATTCAGAACCAGTAGGAGGAAATGGCTGACGGCGAGGACATCCAGCCCCTTGTGTGTGACAATGGAACTGGCATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os11g06390.5 (Oryza sativa), 3'ss of exon 1
-----atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
      ||||   | |  |   |   |     ||  |||     |   |   |             ||       || |    |  | |||    |      |  |||  |  |  ||||| ||    || || ||||||||||| || ||||||||||||||||| ||||| |||
atttcctggagggtttgcgtctagtttctgttggaaaatggccatttcgtgacgtgttgcggcgcatgcctgttgttctgtttttgcgtcaggaattcagAACCAGTAGGAGGAA-ATGGCTGACGGCGAGGACATCCAGCCCCTTGTGTGTGACAATGGAACTGGCATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os03g61970.1 (Oryza sativa), 3'ss of exon 1
-atggaaattatctgaaaaagctaaaaaggtga-atatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
 ||   | || |       | |||     |  | | || ||  ||  |   |  ||  |||     || |   ||      |  |     || ||  | ||| | |       ||||||||   ||| ||||||||||| || || ||||||||||| ||||||||||| |||
aatcatagttctggcctgcaactagtctagcaagaaatatggtaaaaatttattctgtaaca--agtaaatgatggagatggcttatgatttccttgttcagATTA-------ATGGCCGACGGTGAGGATATCCAGCCACTTGTATGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os01g64630.4 (Oryza sativa), 3'ss of exon 1
--atggaaattatctgaaaaagctaaaaaggtgaatattt--gtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
  | |   |   || |    |  |||  |    | |  ||  || ||   ||| ||  |||    | ||  | |   | |       | |||||| |     |   | |  | ||||||| ||    || |||||||||||  | |||||||||||||| ||||||||||| |||
ccaggagtaagctcggtggcacttaagcaaaacagtgcttaagttaatatgcacaa--taattgatttttgaatgcattctgaatactgatatttgttgcagAAACACTTGAGGGATGGCTGAA---GAGGATATCCAGCCTATTGTCTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G082484_T01 (Zea mays), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaa-aacttaaactttgttatactttgtcccctg-acttcatatttctcatgcagGTAATAAAA----------GGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
   |  |||   ||    |    | ||   |  |   |||   | |||       | |   ||  || |  |||  |   | |  |  | ||  |||||||| |   | |             ||||| ||  | || || || |||||||| |||||||||||||||||||||||||| |||
--tgtcattccttgtgctattgcacaaatcgtttgcatgtattggagctttggtgtcagtcttagtaaatgttgctcatggtaactttttttattcatgcagATTGCAGATCATTTAACATAAATGGCTGACTCAGAGGACATTCAGCCCCTAGTCTGTGACAATGGAACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G030169_T02 (Zea mays), 3'ss of exon 1
-------atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcat--atttctcatgcagGTAAT---AAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
       ||     || |||     | || ||    | |  |  | |    |  ||   |||      || |   | |  |    ||  |||||  ||      ||||| | ||   | |   ||||| ||  | || || || |||||||| |||||||||||||||||||||||||| |||
taggcacatcagccttttctccctta-ctgaagtaattagcacatatttgtctacagt-cttggtaaatgcttctcctgataaattgttttcattcatgcagATTGCAGATCATTTAACATAAATGGCTGACGCAGAGGACATTCAGCCCCTAGTCTGTGACAATGGAACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G006765_T02 (Zea mays), 3'ss of exon 1
-atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaac---------ttaaactttgttata-ctttgtcccctgacttcata---tttctcatgcagGTAATA-AAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
 ||| |  ||   ||  ||  | ||  |        |||   |   ||  | |           | |  |||    || ||| ||| |||  | || ||   ||| |  | |||    |  |    ||||| ||    || || ||||||||||| || ||||||||||||||||| ||||| |||
aatgcagttttcttgttaataccaagcattctgccgtttcctattgagatagatattctgttactgatttttaccctagcttggtctcctctcctcctagTGTTTTTGTTCCAGAATCTGTAGCAAATGGCTGACGGCGAGGACATCCAGCCCCTTGTTTGTGACAATGGAACTGGCATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G126010_T02 (Zea mays), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatatttg-tcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatattt---ctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
         ||  | | ||  |  |    ||| |    |  || || ||| ||||  |  ||| |   | | ||| |       | |  |||   ||  | |||   |    || ||||| ||    || |||||||||||  |||| ||||||||||| ||||||||||| |||
--------catgagcagaaagtgtattt-tgattccccgaccaggctgcataactgcatttttctatgaatgtgtactgaacgctgaactttggtctgttacagaatagTTGAGAATGGCTGAC---GAGGATATCCAGCCTATCGTATGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G053299_T01 (Zea mays), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactt----tgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
|   ||||| ||  |   | |||  |   ||||      | ||  |      ||| |||      ||| ||    ||  | |||| |||| |||     ||||| | |       ||||| ||   ||| ||||||||||| || || ||||||||||| ||||||||||| |||
acttaaatt-tccaagccatctagca---tgaactaggttaaaaaaattgtgctttaacaagtgaatatttgagatggtctctgaattcagattgtctgtgcagATCA-------ATGGCTGACGGTGAGGATATCCAGCCACTTGTGTGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G126010_T01 (Zea mays), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatatttg-tcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatattt---ctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
    |||  ||  | | ||  |  |    ||| |    |  || || ||| ||||  |  ||| |   | | ||| |       | |  |||   ||  | |||   |    || ||||| ||    || |||||||||||  |||| ||||||||||| ||||||||||| |||
---taaaccatgagcagaaagtgtattt-tgattccccgaccaggctgcataactgcatttttctatgaatgtgtactgaacgctgaactttggtctgttacagAATAGTTGAGAATGGCTGAC---GAGGATATCCAGCCTATCGTATGTGACAATGGCACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA04G39380.1 (Glycine max), 3'ss of exon 1
-----atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
     ||  |  | ||||  |||  ||  ||  |      ||   ||    |   |  | ||||||  | |||||  | |   |   |  ||   |    |  || |    ||| |||||| ||| |||| ||||| || ||||| ||||||||||||||||||||||||||||||
agaaaataaacgtaatcttcaaagtctgtaagtggctgggttctgcagattgtcta-ttcaaacttgttaatact--ggcaatttgttctatgcatacagt--agTTTGGTAAAAGATGGCTGATGCTGAGGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTGAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA04G39380.2 (Glycine max), 3'ss of exon 1
--------atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
        ||  |  | ||||  |||  ||  ||  |      ||   ||    |   |  | ||||||  | |||||  | |   |   |  ||   |    |  || |    ||| |||||| ||| |||| ||||| || ||||| ||||||||||||||||||||||||||||||
tatagaaaataaacgtaatcttcaaagtctgtaagtggctgggttctgcagattgtcta-ttcaaacttgttaatact--ggcaatttgttctatgcatacagT--AGTTTGGTAAAAGATGGCTGATGCTGAGGATATTCAACCCCTTGTCTGTGACAATGGAACTGGAATGGTGAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA05G32220.2 (Glycine max), 3'ss of exon 1
atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcag--caaaacttaaactttgtt-----atactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
       ||| ||| ||| |               ||  |||   |   |||   ||| |||||  |     | ||| | |  | || |  | |||   |  |||||||    ||| |||||||||| |||| ||||| || ||||| || ||||||||||||||||||||||| |||
-------ttagctgtaaatgtcttggtttcacgggttgttcatataatacaatgtttatactttacttactgacactgtatttcatggcaccctatgctttttgcagGTTTGTAAAAGATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTCAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA06G15520.1 (Glycine max), 3'ss of exon 1
-----atggaaattatctgaaaaagcta-aaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
      || |    | |   |||  ||  ||| ||      | |||  |    | |   | |||||| ||  ||||  | |   | | |  ||   |    || || |    |||  ||||| ||| |||| ||||| || ||||| || |||||||||||||||||||||||||||
agagtttgaagtaaaccctcaaagtctgtaaatggctgggttctgtagattgtcta--ttcaaacttggtggtact--gacaatttattgtatgcgtac--tgtagTTTGGTAAAAAATGGCTGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGTGAAG

upper sequence: Vv04s0044g00580.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: AT5G09810.1 (Arabidopsis thaliana), 3'ss of exon 1
-atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
 ||  |   |  || |       ||  | ||    || ||    |     |       |  || |   | ||  |  |  |  ||||| || ||  |     || | |||  |||||||||  ||| ||||| ||||| || ||||||||||||||||||||||||||||||
aataaacgctg-ctaatcttcgaaactaagttgtgatctgattcgtgtttacttcatgagcttatc-caattcatttc--ggtttcattttactttttttt-tagTGAAAA-ATGGCCGATGGTGAGGATATTCAGCCACTTGTCTGTGACAATGGAACTGGAATGGTGAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161715437|gb|FC069037.1|FC069037
EST:     CCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|294965393|gb|GW837108.1|GW837108
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110703663|gb|EE080716.1|EE080716
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|37185758|gb|CF605111.1|CF605111
EST:     TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161715877|gb|FC067456.1|FC067456
EST:     CCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|30297466|gb|CB974260.1|CB974260
EST:     GCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: GCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161718707|gb|FC066630.1|FC066630
EST:     GCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: GCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|351033564|gb|FQ447723.1|FQ447723
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110732373|gb|EE107605.1|EE107605
EST:     TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161720901|gb|FC070998.1|FC070998
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|161718238|gb|FC066957.1|FC066957
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|351014693|gb|FQ437893.1|FQ437893
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110721058|gb|EE097624.1|EE097624
EST:     CAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|349829797|gb|FQ422110.1|FQ422110
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110724889|gb|EE101112.1|EE101112
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110687074|gb|EE064164.1|EE064164
EST:     CTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161714150|gb|FC064415.1|FC064415
EST:     TTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: TTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110366393|gb|EC930285.1|EC930285
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|161716586|gb|FC067172.1|FC067172
EST:     GAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTGTCTC
genomic: GAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTGTCTC
EST: gi|110721193|gb|EE097911.1|EE097911
EST:     AAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCT-CGATTCTCTCTGCTCTCTG
genomic: AAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110709158|gb|EE084373.1|EE084373
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|37184885|gb|CF604238.1|CF604238
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|27578609|gb|CB001304.1|CB001304
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|161708078|gb|FC056482.1|FC056482
EST:     TCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: TCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161718593|gb|FC067914.1|FC067914
EST:     AAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: AAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110693092|gb|EE069021.1|EE069021
EST:     CCCAAGCCTAGAGACAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110698021|gb|EE075559.1|EE075559
EST:     CCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110708736|gb|EE086617.1|EE086617
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|110700776|gb|EE077727.1|EE077727
EST:     CAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: CAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|27579389|gb|CB002084.1|CB002084
EST:     CAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: CAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161718489|gb|FC067310.1|FC067310
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|161719886|gb|FC069015.1|FC069015
EST:     AGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: AGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161712262|gb|FC061885.1|FC061885
EST:     AGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: AGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|37184908|gb|CF604261.1|CF604261
EST:     CCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|351014010|gb|FQ434162.1|FQ434162
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|37184922|gb|CF604275.1|CF604275
EST:     CCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110722642|gb|EE099048.1|EE099048
EST:     CCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: CCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161720100|gb|FC065464.1|FC065464
EST:     GAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTGTCTC
genomic: GAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTGTCTC
EST: gi|37184175|gb|CF603529.1|CF603529
EST:     CCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|37188829|gb|CF608178.1|CF608178
EST:     CCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110690418|gb|EE067510.1|EE067510
EST:     CTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110393093|gb|EC958006.1|EC958006
EST:     CTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161715776|gb|FC066180.1|FC066180
EST:     GAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTGTC
genomic: GAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTGTC
EST: gi|161717624|gb|FC066903.1|FC066903
EST:     AAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: AAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161707977|gb|FC057784.1|FC057784
EST:     GCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: GCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110701484|gb|EE079104.1|EE079104
EST:     CCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: CCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110699170|gb|EE075932.1|EE075932
EST:     GCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: GCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110703875|gb|EE081193.1|EE081193
EST:     AGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: AGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|351024912|gb|FQ433329.1|FQ433329
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110698024|gb|EE075562.1|EE075562
EST:     TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161720220|gb|FC070872.1|FC070872
EST:     TTTTCCCTAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: TTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161715182|gb|FC065792.1|FC065792
EST:     CAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|351025029|gb|FQ433446.1|FQ433446
EST:     ATTTCATTTTTCCAAGCCTTTTCCCAAGCTTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: ATTTCATTTTTCCAAGCCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|110699598|gb|EE076737.1|EE076737
EST:     TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTTTCTG
genomic: TAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|37185169|gb|CF604522.1|CF604522
EST:     CCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
genomic: CCTTTTCCCAAGCCTAGAGAGAGAGCACCCCAAGCCCATCGTCTTCGGAGATTGGCTTGGATCTCTGTTCCTCCTTCGCCTCCGATTCTCTCTGCTCTCTG
EST: gi|161714410|gb|FC064421.1|FC064421
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG
EST: gi|161707105|gb|FC057295.1|FC057295
EST:     TCCGCAGTCTTT---A-AG
genomic: TCCGCAGTCTTTAAGAGAG


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

agcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG
                              ccctgac  putative branch site (score: 3)
                                         tatttctc  putative PPT
        ttaaactttgttata  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
atggaaattatctgaaaaagctaaaaaggtgaatatttgtcaagcagcaaaacttaaactttgttatactttgtcccctgacttcatatttctcatgcagGTAATAAAAGGATGGCCGATACTGAAGATATCCAGCCCCTCGTCTGTGACAATGGAACTGGAATGGTGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- -gaaatta
- - - - - - tgaaaaa
- - - - - - - - - - - aaaaagg
- - - - - - - - - - - - - - - - - - - -tcaagca
- - - - - - - - - - - - - - - - - - - - - - - gcaaaac