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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gcataacttttggaattgcaggcttactttgatgccccagaaggagatgtccccgttgctcttgaactgagcaccatggccaaaggcatggcttggataaatggtaaaagcattgactgatactgggtttcttacctctcccctcttggaaagCCTTCCCAGTCAGT

Basic information

species Vitis vinifera
transcript Vv04s0023g03840.t01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaatggtaaaagcattgactgatactgggtttcttacctctcccctcttggaaagCCTTCCCAGTCAGT
                              ttcttac  putative branch site (score: 2)
                             tttcttacctctcccc  CT-rich tract
                             tttctta  TA-rich tract