Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgactctttgcttttaattaaaaatactggtttatgatgatttattagtaaccaaaaagaaagcaagtgagttagaaacttcaattgttcgtcagGTTCCTCGAGGGCTGGAGAACAAAGGGAATATTTACATGGCCAGTTCGAGCCCACCAAGCGTGCTTAAAGCATACTATGAGCAATTCCAAAGCGATTTCT

Basic information

species Vitis vinifera
transcript Vv04s0023g02240.t01
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tttattagtaaccaaaaagaaagcaagtgagttagaaacttcaattgttcgtcagGTTCCTCGAGGGCTGGAGAACAAAGGGAATATTTACATGGCCAGTTCGAGCCCACCAAGCGTGCTTAAAGCATACTATGAGCAATTCCAAAGCGATTTCT
     tagtaac  putative branch site (score: 1)
             aaaaagaaa  TA-rich tract