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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG

Basic information

species Vitis vinifera
transcript Vv03s0038g00790.t01
intron # 2
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os02g34510.1 (Oryza sativa), 3'ss of exon 1
----gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
     |    ||||||  |  ||| |    ||           |        || ||||| | |  |  ||  || |||  | ||||||   |||| | | |||||| ||||| || ||||| ||||| ||||| |||||||||||||| || |||||||| ||||| || || || || || || |||||||| || ||||||
atttcatgacactttgtgcagcttgattggaaccacaggaattttgatttttatgctttgcttggtgcgctgttc-taacat-aatctact-tttgctct-cagGGCAAATGCTCAACAGCCAAAACTGTTTGTGGGTATGATCCTCATCCTTATCTTTGCGGAAGCGCTTGCACTCTATGGTCTCATTGTTGGTATCATCTTG

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: LOC_Os05g01560.1 (Oryza sativa), 3'ss of exon 2
--gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatcta--tgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
   |  | |  | |     ||||   ||  ||| || | | | || | |      ||||| | ||||  |||    |||||  |||   | |  |  | |||||||| |||||||||||||| ||  | || || || ||||||||||| || |||||||| ||||| || || || || ||||| |||||||| || ||| | 
aaaatagcagatagagtttctttct-atctgttactattg-taagtaaagcactcttgtttgcagga--aattgacatttggttctggtttacctcctctgcagGGCCAATGCGCAGCAGCCAAAGTTGTTCGTGGGCATGATCCTCATCCTTATCTTTGCAGAAGCTCTTGCTCTGTATGGCCTGATTGTTGGTATCATCCTC

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G028432_T01 (Zea mays), 3'ss of exon 1
-gactgtactttggacgactttaggataagttgctt-tggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
    |  ||  | | |    || ||| ||   | || |      ||     | | | |   |    |    || | ||    |    || | | ||  ||||||| || || |||||||| || || ||||| || ||||||||||| |||||||| |||||||| || ||||||||||| || || || ||||| ||| | 
cacttaaacacttgtcctacttgggaaaatcggattgtcaaccgggctggctgcctagacggcgacatc--tcctcatcctgacacttgttcttttgcgcagGGCGAACGCTCAGCAGCCAAAGCTGTTTGTGGGCATGATCCTCATCCTCATCTTCGCTGAAGCGCTCGCCCTATACGGTCTCATCGTCGGCATCATCCTC

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G101020_T01 (Zea mays), 3'ss of exon 2
gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
  |      |||  | | ||    |    |    |   |||    |    |  |    |     ||   ||    |   ||    || | | || |||||||| || || |||||||| ||  | |||||||| ||||||||||| || || |||||||||||||| ||||| || || || || || ||||||||| | 
ttcaaagagttgtcctagttcgaaaattatattatcaactggaacctgtctactctagaccgcaacatctctccgtcctaacacttgttcttttgtgcagGGCGAACGCTCAGCAGCCGAAGTTGTTTGTTGGCATGATCCTCATCCTTATTTTTGCTGAAGCACTTGCCCTCTATGGTCTCATCGTCGGCATTATCCTC

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GRMZM2G177005_T01 (Zea mays), 3'ss of exon 2
gactgtactttggacgactttaggataa-gttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
 | |          | |||||    |   ||| |||    |   ||  |    |  |     |    | |   | | |    | |  |       || |||||| |||||||| ||||| || ||||| ||||| ||||||||||| ||||| || || ||||| || || || || || || |||||||| |||||| | 
-agtagctcacatgcaactttctcctggcgtttcttcttttacagaggaggcatgggaattgaaattttagtttgactaatttttgggccaccgatttcagGGCAAATGCGCAACAGCCAAAGCTTTTCGTTGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCTCTCTATGGTCTAATTGTTGGAATTATCCTT

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: AC216067.3_FGT002 (Zea mays), 3'ss of exon 2
gactgtactttggacgactttaggataagttgctttg-gctgaggacaaattctttgttagtaggactaatcataat--ttgaatctatgatttgtt--ttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
     || | |       || ||  |   ||  |||  |  |     | || |||  || | |     |||  || |   | | | | ||      |  || |||||| ||||| || ||||| || |||||||| || ||||||||||| ||||| || || ||||| || || || ||||| || |||||||| |||||| | 
-----taatctcctttctttgagcgtttcttcttttaaggaggcagtacatgcttatttgggaattgaaattttattgacttattttctgggccactgatttcagGGCGAATGCACAACAGCCGAAGCTTTTTGTGGGCATGATCCTCATCCTCATTTTCGCAGAAGCGCTTGCTCTGTACGGTCTCATTGTTGGAATTATCCTT

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA12G04090.1 (Glycine max), 3'ss of exon 2
gactgtac-tttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaa-tcataatttgaatc-tatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
   ||||  ||| |  ||   |  ||||  | | | |  ||      |   |   |  ||| |    ||  |   | ||||||   | |   || || ||||| || ||||| |||||||| || ||||||||||| ||||| |||||||||||||||||||| || || ||||| || || || |||||||| |||||| ||
---tgtatattttgctgatagtttgatacatggatataccttttataatgattcctaatagaaattttaccttgaagtttgaacaatttatcttcttatgcagAGCCAATGCACAGCAGCCAAAGCTTTTTGTTGGAATGATTCTCATTCTCATCTTTGCTGAGGCTCTTGCCCTGTATGGACTCATTGTTGGTATTATCCTG

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA04G00950.2 (Glycine max), 3'ss of exon 1
----gactgtactttggacgactttaggata-agttgctttgg--ctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
       | |  ||| | |     ||| ||  | ||| | ||    ||| |    ||| |   ||   |  | || | || | |  |||||        || ||||| || ||||| |||||||| |||||||||||||| ||||| ||||| ||||| ||||||||||| || ||||| || || || || ||||| |||||| ||
gaacatatatctttttgcctttactagcatgcatttgttgtgaatttgacggtggattttccttttacaataatactgattaatc-aatctgc------ttctgcagAGCCAATGCACAGCAGCCAAAACTTTTTGTTGGAATGATTCTCATCCTCATTTTTGCTGAAGCTCTTGCCCTTTATGGTCTAATCGTTGGTATTATCCTG

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA06G00980.1 (Glycine max), 3'ss of exon 2
------gactgtactttggacgactttaggataagttgctttgg--ctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
         | | | ||      |||  | ||  |||| | ||    |||      ||| |   ||   |  | || | || |  | ||||||       || | ||| || ||||| || || || |||||||||||||| ||||| ||||| ||||| |||||||||||||| ||||| || || || |||||||| |||||| ||
atatatctttttgcctttactagctt--gcatttgttgttgtgaatttgacagtggattttccttttacaataatactgattaagtcaatctac------ttctacagAGCCAATGCACAACAACCAAAACTTTTTGTTGGAATGATTCTCATCCTCATTTTTGCTGAAGCACTTGCCCTTTATGGTCTCATTGTTGGTATTATCCTG

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: GLYMA11G11760.1 (Glycine max), 3'ss of exon 2
gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataa----tttgaatc-tatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
      | |   |   | |||   | | |    |     | |  |  |  |   |  ||  |    || |   ||    ||||||   | |   || ||  |||| || ||||| |||||||| || ||||||||||| ||||| || |||||||| ||||||||||| || || || || || || |||||||| |||||| ||
-----cattgatggttaattttatacagggatatagtttttataatgatattcctaataaaattcttattttgaagaagtttgaacaatttatcttcttccgcagAGCCAATGCACAGCAGCCAAAGCTTTTTGTTGGAATGATTCTTATTCTCATTTTTGCTGAAGCTCTTGCTCTCTATGGTCTCATTGTTGGTATTATCCTG

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: EFJ14420 (Selaginella moellendorffii), 3'ss of exon 2
gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
                         ||||||   | |    |   | |  | ||| || | |   ||   |||   |||  |   || |||  |||||||||| ||||||||||| || || ||||||||||| ||||||||||||||||||||||| || ||  |||| |||||||| || ||||| || || ||| ||
------------------------gtaagttcgatcgatcaaaagccatctttttcttcg-atatct--ccattgattggtt---tgtttttctttgcagGGCGAATGCGCAGCAACCCAAGCTTTTTGTTGGAATGATCCTCATTCTCATCTTTGCCGAGGCTTTGGCTCTATACGGTCTCATTGTGGGAATCATCCTG

upper sequence: Vv03s0038g00790.t01 (Vitis vinifera), 3'ss of exon 2
lower sequence: EFJ26016 (Selaginella moellendorffii), 3'ss of exon 2
gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
                         ||||||   | |    |  || |  | ||| || | |   ||   |||   |||  |   || |||  |||||||||| ||||||||||| || || ||||||||||| |||||||| |||||||||||||| || ||  |||| |||||||| || ||||| || || ||| ||
------------------------gtaagttcgatcgatcaaaaaccatctttttcttcg-atatct--ccattgattggtt---tgtttttctttgcagGGCGAATGCGCAGCAACCCAAGCTTTTTGTTGGAATGATCCTGATTCTCATCTTTGCCGAGGCTTTGGCTCTATACGGTCTCATTGTGGGAATCATCCTG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|28961658|gb|CB340835.1|CB340835
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTCGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|22012230|gb|BQ797264.1|BQ797264
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|37188667|gb|CF608016.1|CF608016
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110399183|gb|EC965677.1|EC965677
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110732826|gb|EE108450.1|EE108450
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110373763|gb|EC938094.1|EC938094
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|161708199|gb|FC057843.1|FC057843
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26262125|gb|CA813188.1|CA813188
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGGTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26257238|gb|CA808301.1|CA808301
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110687849|gb|EE065729.1|EE065729
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|161709903|gb|FC058063.1|FC058063
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|351017220|gb|FQ435572.1|FQ435572
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAACAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110376865|gb|EC941943.1|EC941943
EST:     GGGCTCTCGGCCGGAATGGCA-TCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|37186711|gb|CF606064.1|CF606064
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAACAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110366218|gb|EC929983.1|EC929983
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|28970075|gb|CB349108.1|CB349108
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110362221|gb|EC925739.1|EC925739
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|30253457|gb|CB971008.1|CB971008
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCACCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|30303487|gb|CB980281.1|CB980281
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCCCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|161717215|gb|FC067221.1|FC067221
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110412472|gb|EC978222.1|EC978222
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110369154|gb|EC933302.1|EC933302
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|87586397|gb|DY474679.1|DY474679
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110361267|gb|EC924730.1|EC924730
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|30303548|gb|CB980342.1|CB980342
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26258186|gb|CA809249.1|CA809249
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110400342|gb|EC966900.1|EC966900
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110365336|gb|EC928162.1|EC928162
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|30133643|gb|CB918982.1|CB918982
EST:     CGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: CGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|37185283|gb|CF604636.1|CF604636
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAACAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|46910860|gb|CN546235.1|CN546235
EST:     GCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110360591|gb|EC923820.1|EC923820
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26262006|gb|CA813069.1|CA813069
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110407154|gb|EC972750.1|EC972750
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|45368221|gb|CK906580.1|CK906580
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110394753|gb|EC960047.1|EC960047
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|83277316|gb|DV941324.1|DV941324
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATCGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|37186658|gb|CF606011.1|CF606011
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|161713488|gb|FC063107.1|FC063107
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|33402830|gb|CF208457.1|CF208457
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCACCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26257916|gb|CA808979.1|CA808979
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGTTGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26262871|gb|CA813934.1|CA813934
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTAGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCACTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|33408540|gb|CF214167.1|CF214167
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26261836|gb|CA812899.1|CA812899
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTTATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCACTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|351022760|gb|FQ428669.1|FQ428669
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAACAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|161717263|gb|FC065252.1|FC065252
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|161712935|gb|FC062408.1|FC062408
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|352785522|gb|FQ477736.1|FQ477736
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26265497|gb|CA816560.1|CA816560
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTAGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26262445|gb|CA813508.1|CA813508
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGGGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|26267702|gb|CA818765.1|CA818765
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTAGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110363531|gb|EC927125.1|EC927125
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCGTAAACTTTTTGTCGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110360215|gb|EC923019.1|EC923019
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|33408110|gb|CF213737.1|CF213737
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110410700|gb|EC976392.1|EC976392
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|30126068|gb|CB911407.1|CB911407
EST:     GCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCGCAACAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|30253379|gb|CB970930.1|CB970930
EST:     GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
EST: gi|110712681|gb|EE087941.1|EE087941
EST:     GGGCTCTCAGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAG                         GGCTAATGCACAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT
genomic: GGGCTCTCGGCCGGAATGGCAATCGGGATTGTTGGCGATGCCGGTGTCAGgtaattgcat ... tgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCAT


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

caaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG
                  gactaat  putative branch site (score: 2)
                                           tttgtttt  putative PPT
                     taatcataatttgaat  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gactgtactttggacgactttaggataagttgctttggctgaggacaaattctttgttagtaggactaatcataatttgaatctatgatttgttttgcagGGCTAATGCGCAGCAGCCTAAACTTTTTGTTGGTATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTATACGGCCTTATTGTTGGCATTATCTTG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGC
- - - - - - - - - - -aggataa
- - - - - - - - - - - - - - - tgctttg
- - - - - - - - - - - - - - - - - - - - - ggacaaa