Sequence
atgc intronic sequence ATGC exonic sequence...aaatttccttccaattttttttttctcgaaaatgaaccgaacataacctaaatatttataatatagagatgaccccatgtcttgattggggaatttgcagGTCTGATCGATAGGACACGCATGTTTGTCCTATTTAACTAGCAGAGGGTGCATTGCAGAAAGCGAGGTTGATAGTTCAGTGATGGTCGTGCAGTAGTGGT
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.acctaaatatttataatatagagatgaccccatgtcttgattggggaatttgcagGTCTGATCGATAGGACACGCATGTTTGTCCTATTTAACTAGCAGAGGGTGCATTGCAGAAAGCGAGGTTGATAGTTCAGTGATGGTCGTGCAGTAGTGGT
aatatttataatatag TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
aaatttccttccaattttttttttctcgaaaatgaaccgaacataacctaaatatttataatatagagatgaccccatgtcttgattggggaatttgcagGTCTGATCGATAGGACACGCATGTTTGTCCTATTTAACTAGCAGAGGGTGCATTGCAGAAAGCGAGGTTGATAGTTCAGTGATGGTCGTGCAGTAGTGGT
- - - ccttcca
- - - - - - - - - - - - - -gaaaatg
- - - - - - - - - - - - - - - - - aaccgaa
- - - - - - - - - - - - - - - - - - - - - - aacctaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - atagaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gacccca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgattgg