1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
gtgagaataaatgggtcttctgttatgtacgtccatgctttggtatatgattttttttttttttacttttatttttatttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATACTGAAGCACAAGAGTTTGAGTTTGAGATTGCAAGGATGCGACACAG
species | Vitis vinifera |
transcript | Vv00s0323g00040.t01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGGGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|18458960|gb|BM437238.1|BM437238
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|28961923|gb|CB340981.1|CB340981
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTC-TGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349812568|gb|FQ407187.1|FQ407187
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|352782030|gb|FQ469328.1|FQ469328
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351013034|gb|FQ433761.1|FQ433761
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|294966047|gb|GW837414.1|GW837414
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349818883|gb|FQ411578.1|FQ411578
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351024091|gb|FQ423514.1|FQ423514
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|28964858|gb|CB343891.1|CB343891
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349825131|gb|FQ415678.1|FQ415678
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|28964910|gb|CB343943.1|CB343943
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|110372937|gb|EC937134.1|EC937134
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351052007|gb|FQ450698.1|FQ450698
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351023061|gb|FQ430936.1|FQ430936
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351014068|gb|FQ434220.1|FQ434220
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351034821|gb|FQ458178.1|FQ458178
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349810037|gb|FQ398662.1|FQ398662
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349818743|gb|FQ409277.1|FQ409277
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349833110|gb|FQ416488.1|FQ416488
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|26261480|gb|CA812543.1|CA812543
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351035150|gb|FQ458507.1|FQ458507
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351044715|gb|FQ443246.1|FQ443246
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|110427789|gb|EC994240.1|EC994240
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351024906|gb|FQ433323.1|FQ433323
genomic: TCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351051811|gb|FQ455225.1|FQ455225
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCGGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|32248420|gb|CD714239.1|CD714239
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: GCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|32244984|gb|CD710803.1|CD710803
genomic: GCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349832594|gb|FQ421952.1|FQ421952
genomic: TGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351043470|gb|FQ428942.1|FQ428942
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349823321|gb|FQ402520.1|FQ402520
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351014302|gb|FQ437304.1|FQ437304
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|352769266|gb|FQ471415.1|FQ471415
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|110699852|gb|EE077230.1|EE077230
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351013822|gb|FQ433974.1|FQ433974
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351017299|gb|FQ435651.1|FQ435651
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351044247|gb|FQ447601.1|FQ447601
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|110684606|gb|EE062073.1|EE062073
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCNAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351025451|gb|FQ435143.1|FQ435143
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351040609|gb|FQ438153.1|FQ438153
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAA--GAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|351045771|gb|FQ440956.1|FQ440956
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349825132|gb|FQ415679.1|FQ415679
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|349830964|gb|FQ418248.1|FQ418248
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATEST: gi|18459240|gb|BM437518.1|BM437518
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
EST: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAG TCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
genomic: TCCAGCGCCATGTTCTTGAGGAAAAAGAGCGGCGCCAAGCTCTAAGGCAGgtgagaataa ... ttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGAT
catgctttggtatatgattttttttttttttacttttatttttatttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATACTGAAGCACAAGAGTTTGAGTTTGAGATTGCAAGGATGCGACACAG
ttttttttttttttac CT-rich tract
tatatgattttttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gtgagaataaatgggtcttctgttatgtacgtccatgctttggtatatgattttttttttttttacttttatttttatttttacatagTCTCGGGTTATTCCGGATACCCCAGAGGAGTTGATTGAGTACTTTCTTGATACTGAAGCACAAGAGTTTGAGTTTGAGATTGCAAGGATGCGACACAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG