1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
gttcttattctcatagaaatgaactttctctatatcaggctcacttatcaggttttgtgaagtagttatagaatatcttgaagtaacccttgaactccaccttgcttggttcagATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCTAGTAACAAGCGAAAGATAATTTGTGATGATGCCCTCCGCTTGGTGTTCG
species | Vitis vinifera |
transcript | Vv00s0187g00240.t01 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAACTGAACTTCAGGCTGTTGTTGGCGAGCCAACCATGCCAAGGACACAG ATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCTEST: gi|351028427|gb|FQ427323.1|FQ427323
genomic: CAACTGAACTTCAGGCTGTTGTTGGCGAGCCAACCATGCCAAGGACACAGgttcttattc ... cttggttcagATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCT
EST: CAACTGAACTTCAGGCTGTTGTTGGCGAGCCAACCATGCCAAGGACACAG ATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCT
genomic: CAACTGAACTTCAGGCTGTTGTTGGCGAGCCAACCATGCCAAGGACACAGgttcttattc ... cttggttcagATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCT
aagtagttatagaatatcttgaagtaacccttgaactccaccttgcttggttcagATTGTGAAGCAGCTTTGGGCATACATTAGGAAAAACAACCTCCAAGATCCTAGTAACAAGCGAAAGATAATTTGTGATGATGCCCTCCGCTTGGTGTTCG
aagtaac putative branch site (score: 2)
ccttgctt putative PPT
ttatagaatatctt TA-rich tract