1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
...cttatagcatcgtcaccagggataaattgagaaaattgtttttcatatttgagttttcagtctcaaacttttttctgacattgtttcactctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
species | Vitis vinifera |
transcript | Vv19s0085g00880.t01 |
intron # | 19 |
splice site | 3' |
intron type | U2 |
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|351040417|gb|FQ434550.1|FQ434550
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110422366|gb|EC988688.1|EC988688
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110360909|gb|EC924352.1|EC924352
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|32245740|gb|CD711559.1|CD711559
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|352765000|gb|FQ473648.1|FQ473648
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110396601|gb|EC962293.1|EC962293
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110420926|gb|EC987213.1|EC987213
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|34364258|gb|CF405843.1|CF405843
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|349820783|gb|FQ404157.1|FQ404157
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATA-AAGCATTAACTGATGGGGCCAAGEST: gi|34320384|gb|CF373138.1|CF373138
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|77580016|gb|DV218890.1|DV218890
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|77586095|gb|DV222145.1|DV222145
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|33407655|gb|CF213282.1|CF213282
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110373835|gb|EC938222.1|EC938222
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110395231|gb|EC960880.1|EC960880
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110384512|gb|EC948953.1|EC948953
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110363491|gb|EC927084.1|EC927084
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110378892|gb|EC944048.1|EC944048
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110393201|gb|EC958271.1|EC958271
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|27585780|gb|CB008475.1|CB008475
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|30135354|gb|CB920692.1|CB920692
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110714572|gb|EE091629.1|EE091629
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110420827|gb|EC987109.1|EC987109
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110418290|gb|EC984428.1|EC984428
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110413996|gb|EC979816.1|EC979816
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110728458|gb|EE104042.1|EE104042
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110372127|gb|EC936274.1|EC936274
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|34543207|gb|CF511439.1|CF511439
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|30128422|gb|CB913761.1|CB913761
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|33407050|gb|CF212677.1|CF212677
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|352763958|gb|FQ465408.1|FQ465408
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|30134739|gb|CB920077.1|CB920077
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAATGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAA-TATGTGTGCTTCEST: gi|351029837|gb|FQ427677.1|FQ427677
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTC
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAACAGTAACTGATGGGGCCAAGEST: gi|110430209|gb|EC996749.1|EC996749
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110686641|gb|EE064513.1|EE064513
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|352769124|gb|FQ471072.1|FQ471072
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110693458|gb|EE069709.1|EE069709
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110371647|gb|EC935762.1|EC935762
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110375935|gb|EC940965.1|EC940965
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|32459450|gb|CD800624.1|CD800624
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|29781739|gb|CB346445.2|CB346445
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|34318898|gb|CF371652.1|CF371652
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGAAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|27586231|gb|CB008926.1|CB008926
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|37190549|gb|CF609898.1|CF609898
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGGTEST: gi|351040173|gb|FQ425259.1|FQ425259
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGGT
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAGEST: gi|110688619|gb|EE067379.1|EE067379
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
EST: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAA ATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
genomic: CTGGTCTTGGTAGGGAAGGTTCCAAATATGGGATGGATGAATTTCTGGAAgtaagtaatc ... ctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
tatttgagttttcagtctcaaacttttttctgacattgtttcactctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
tttcactct CT-rich tract
aaactttttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| cttatagcatcgtcaccagggataaattgagaaaattgtttttcatatttgagttttcagtctcaaacttttttctgacattgtttcactctgattgcagATGAAATATGTGTGCTTCGGAAATATAAGCAGTAACTGATGGGGCCAAG
- - - - - -gtcacca
- - - - - - - - - -ggataaa
- - - - - - - - - - - - - - -agaaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - -cagtctc