1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtaatcttcaaattttttttttttttatcaataaaacatattttcgttatctgtgttggtttcatcctaattctcttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTAAAAGGGAAAATAAGAATCACCACACGATGCTTATGGCTTGACAAAGGG
species | Vitis vinifera |
transcript | Vv17s0000g01640.t01 |
intron # | 15 |
splice site | 3' |
intron type | U2 |
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTEST: gi|351015920|gb|FQ431875.1|FQ431875
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTEST: gi|351044679|gb|FQ443210.1|FQ443210
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTEST: gi|351044040|gb|FQ431471.1|FQ431471
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTEST: gi|352790717|gb|FQ478265.1|FQ478265
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTEST: gi|351030219|gb|FQ432157.1|FQ432157
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTEST: gi|351013519|gb|FQ425550.1|FQ425550
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
EST: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAG CATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
genomic: TGCATTGATGAGAGACTAAGAATTGCATCAGATGGTATTATCGTAATCAGgtaatcttca ... cttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTT
aataaaacatattttcgttatctgtgttggtttcatcctaattctcttggtacagCATGGAAATATTACGCCCTCAAGTTGTAGATGGTGTAACTGAAAAAAGCTTAAAAGGGAAAATAAGAATCACCACACGATGCTTATGGCTTGACAAAGGG
tcctaat putative branch site (score: 2)
ttctctt CT-rich tract
aacatatttt TA-rich tract