1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
...gaagttctaaagggtgcttttatgtttaatggagagaaaaaagagggaactctataattctgtatttttcaacaacttactataacctttttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCAATTATGGAAAGTTTCAAGAAGTTCAATGATGAGTTCATGGAACAATAT
species | Vitis vinifera |
transcript | Vv00s0225g00130.t01 |
intron # | 13 |
splice site | 3' |
intron type | U2 |
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|30135756|gb|CB921094.1|CB921094
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|29785334|gb|CB342233.2|CB342233
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCCCTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCCCTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|71877299|gb|DT026354.1|DT026354
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|32247739|gb|CD713558.1|CD713558
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG NGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|352769572|gb|FQ468500.1|FQ468500
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|351023682|gb|FQ448233.1|FQ448233
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: CCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCCCTTAAGAACAACEST: gi|18458318|gb|BM436596.1|BM436596
genomic: CC-ACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAAC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGAACATGCCTGEST: gi|46919321|gb|CN548650.1|CN548650
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGA-CATGCCTG
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTTTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|32248182|gb|CD714001.1|CD714001
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCANGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|29784204|gb|CB344645.2|CB344645
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|77581124|gb|DV219488.1|DV219488
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|32247905|gb|CD713724.1|CD713724
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|28958445|gb|CB339217.1|CB339217
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCCCTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|33409332|gb|CF214959.1|CF214959
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|30251649|gb|CB969382.1|CB969382
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110367597|gb|EC931540.1|EC931540
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110690265|gb|EE067211.1|EE067211
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|28960253|gb|CB340127.1|CB340127
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|30325827|gb|CD009089.1|CD009089
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|351037170|gb|FQ457003.1|FQ457003
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGAACAACCATCTTGCCAGCTGAGGAAGAGATGCCTGCEST: gi|33409522|gb|CF215149.1|CF215149
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|30322019|gb|CD005281.1|CD005281
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|28962352|gb|CB341385.1|CB341385
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCCCTGGAATTTCCCCTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGAAAGACATGCCTGCEST: gi|30251685|gb|CB969418.1|CB969418
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCCCTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110377606|gb|EC942684.1|EC942684
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110361483|gb|EC924957.1|EC924957
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|351026640|gb|FQ436293.1|FQ436293
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGAACAACCATCTTGCCAGCTGAGGAAGAGATGCCTGCEST: gi|110378242|gb|EC943362.1|EC943362
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|30299121|gb|CB975915.1|CB975915
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|352772700|gb|FQ472743.1|FQ472743
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|352781103|gb|FQ466416.1|FQ466416
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|351026761|gb|FQ436414.1|FQ436414
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAGGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110372740|gb|EC936928.1|EC936928
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|32249335|gb|CD715154.1|CD715154
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: CAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|26263684|gb|CA814747.1|CA814747
genomic: CAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110417553|gb|EC983619.1|EC983619
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|32250342|gb|CD716161.1|CD716161
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|22012406|gb|BQ797440.1|BQ797440
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: CCACTGGAATTTGCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|26265676|gb|CA816739.1|CA816739
genomic: CCACTGGAATTT-CCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|33409576|gb|CF215203.1|CF215203
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|27578604|gb|CB001299.1|CB001299
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110362940|gb|EC926503.1|EC926503
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110379655|gb|EC944867.1|EC944867
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|351025435|gb|FQ435127.1|FQ435127
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAAAACAACCATCTTGCCAGCTGAAGAAGAAATGCCTGCEST: gi|110377565|gb|EC942640.1|EC942640
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|71874055|gb|DT023110.1|DT023110
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110424776|gb|EC991148.1|EC991148
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|110399539|gb|EC966047.1|EC966047
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: TTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|29784845|gb|CB341320.2|CB341320
genomic: TTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGAAAGACATGCCTGCEST: gi|32248822|gb|CD714641.1|CD714641
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|30299262|gb|CB976056.1|CB976056
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|351040056|gb|FQ425142.1|FQ425142
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCEST: gi|32245345|gb|CD711164.1|CD711164
genomic: GCCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAGAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGC
EST: CCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAAAGAAGG GGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTG
genomic: CCACTGGAATTTCCACTGTCCCTGGTTCAGGATTTGGACAGAAA-GAAGGgtaatttttt ... ttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTG
ggaactctataattctgtatttttcaacaacttactataacctttttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCAATTATGGAAAGTTTCAAGAAGTTCAATGATGAGTTCATGGAACAATAT
cctttttgt CT-rich tract
tataattctgtatttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gaagttctaaagggtgcttttatgtttaatggagagaaaaaagagggaactctataattctgtatttttcaacaacttactataacctttttgtgtctagGGTCTTCCACTTAAGGACAACCATCTTGCCAGCTGAGGAAGACATGCCTGCAATTATGGAAAGTTTCAAGAAGTTCAATGATGAGTTCATGGAACAATAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - -gaaaaaa