1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
gtaagtttctaatctatgcattcttgatttgttattatattgcatataagaacagtggtgcattgttagaaggataaaaaattgggtagtaagaaaataaaaataaaattagcaactcaaacattgatatgtatgaacattttcattaatgaatggccctaatggggttttgtgtttgtgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGGAGTTTAAAATGAACTTCAGTTGTGTGATGATGATACAGAATGAAGGCT
species | Vitis vinifera |
transcript | Vv00s0769g00010.t01 |
intron # | 12 |
splice site | 3' |
intron type | U2 |
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAATTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|351052096|gb|FQ455389.1|FQ455389
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|351030826|gb|FQ438862.1|FQ438862
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|32245865|gb|CD711684.1|CD711684
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|110690586|gb|EE067825.1|EE067825
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGACACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|30130409|gb|CB915748.1|CB915748
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|30129057|gb|CB914396.1|CB914396
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|352790570|gb|FQ478209.1|FQ478209
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|83275789|gb|DV939797.1|DV939797
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGACAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|110397415|gb|EC963150.1|EC963150
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|30136452|gb|CB921790.1|CB921790
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|30134437|gb|CB919775.1|CB919775
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|32245426|gb|CD711245.1|CD711245
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|30132983|gb|CB918322.1|CB918322
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|22011028|gb|BQ796062.1|BQ796062
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|27582480|gb|CB005175.1|CB005175
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|110714352|gb|EE091161.1|EE091161
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|349830992|gb|FQ418276.1|FQ418276
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCGCTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|32249958|gb|CD715777.1|CD715777
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGEST: gi|110689806|gb|EE066352.1|EE066352
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTG
EST: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAAT AAAGCAACTAAGGAGGCAGAACC
genomic: ATGGCAACATGTTTGCAAGGATGAACAAGTTAGAGGCACTCGAGACCAATgtaagtttct ... tgatatgcagAAAGCAACTAAGGAGGCAGAACC
tgaacattttcattaatgaatggccctaatggggttttgtgtttgtgatatgcagAAAGCAACTAAGGAGGCAGAACCAATGAGCATAGACAGCAAGGCATAAGTGGAGTTTAAAATGAACTTCAGTTGTGTGATGATGATACAGAATGAAGGCT
ccctaat putative branch site (score: 3)
attttcattaatgaat TA-rich tract