Skip to another splice site:
1  
 5'  3'   
2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgccatcgttctggagactgctaagactgaatcttcctaagtggaaagaaaccggtataggatgtttaagtgcggttctatctggtgtcgtccaactcgcttatgcatttgccatgggatcaataatatccgtatattttttgtctgaccatgagGAGATGCAAGAGCAAACCAAAACTTATTATCTATGTTTTGTTGCATTGTCTGTGTTCTCACTATTGGTAAATCTCAACCAACATTACAATTTTGCAGTAA

Basic information

species Vitis vinifera
transcript Vv19s0085g00110.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttatgcatttgccatgggatcaataatatccgtatattttttgtctgaccatgagGAGATGCAAGAGCAAACCAAAACTTATTATCTATGTTTTGTTGCATTGTCTGTGTTCTCACTATTGGTAAATCTCAACCAACATTACAATTTTGCAGTAA
                                          gtctgac  putative branch site (score: 3)
 ttttttgtct  CT-rich tract
 aataatatccgtatat  TA-rich tract