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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaccccttttttttttttttggtcgttttcacttctactgattcacaattttttttcccggaaaatgatttcccagccctaaatttgtccactcttcacatgcagGGATGGACACGTCAGATTCGGTTGCTACGACAGCCATGCATTTCCCAGCTTCTGGTGCTCCCATTAAGAG

Basic information

species Vitis vinifera
transcript Vv19s0014g03610.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ttttttcccggaaaatgatttcccagccctaaatttgtccactcttcacatgcagGGATGGACACGTCAGATTCGGTTGCTACGACAGCCATGCATTTCCCAGCTTCTGGTGCTCCCATTAAGAG
                          ccctaaa  putative branch site (score: 3)
                                 tttgtccactcttc  CT-rich tract
           aaaatgattt  TA-rich tract