Sequence
atgc intronic sequence ATGC exonic sequence...ttaatactgggaatcaatttatcgaaaactgataacaaactctctcataaaaactcacataatggcagacccactggattttcattgaccttttgtgcagGATTTGAAACACGAGAGCAATTCAAATGGAGTATTTCTCGCTGATTCTCACTACAATGACCATGGAATCTGTATTGTTGTTCCGGGAAGCAGTGGAATTC
Basic information
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.cataaaaactcacataatggcagacccactggattttcattgaccttttgtgcagGATTTGAAACACGAGAGCAATTCAAATGGAGTATTTCTCGCTGATTCTCACTACAATGACCATGGAATCTGTATTGTTGTTCCGGGAAGCAGTGGAATTC
ccttttgt CT-rich tract
attttcatt TA-rich tract
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ttaatactgggaatcaatttatcgaaaactgataacaaactctctcataaaaactcacataatggcagacccactggattttcattgaccttttgtgcagGATTTGAAACACGAGAGCAATTCAAATGGAGTATTTCTCGCTGATTCTCACTACAATGACCATGGAATCTGTATTGTTGTTCCGGGAAGCAGTGGAATTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA
- -atactgg
- - - - - gaatcaa
- - - - - - - - - - - cgaaaac
- - - - - - - - - - - - - - - - -aacaaac
- - - - - - - - - - - - - - - - - - - - - - - - aaaaact
- - - - - - - - - - - - - - - - - - - - - - - - - - - -cacataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gacccac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cattgac