1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' |
gtatgtttcttcttgcttcattctctcgtttgattgcgtagaaatcggaatatgagctaatcggaacttgctttcctttgatcttcccactgttttcccggcagccaaacggagcctgttttattgggcttttcttttctactttgtatatctgtttatggattgattttcttgtatcttcgcagTCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTAACGGTCTCGGAG
species | Vitis vinifera |
transcript | Vv18s0001g12560.t01 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACT TCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTAEST: gi|110701968|gb|EE080148.1|EE080148
genomic: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACTgtatgtttct ... atcttcgcagTCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTA
EST: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACT TCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTAEST: gi|110699858|gb|EE077237.1|EE077237
genomic: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACTgtatgtttct ... atcttcgcagTCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTA
EST: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACT TCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTAEST: gi|110732428|gb|EE107716.1|EE107716
genomic: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACTgtatgtttct ... atcttcgcagTCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTA
EST: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACT TCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTA
genomic: TCGCTTGTGTTCTCATCGTCGCCTTGGGTCCTATTCAGTTCGGTTTCACTgtatgtttct ... atcttcgcagTCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTA
tttcttttctactttgtatatctgtttatggattgattttcttgtatcttcgcagTCTGGTTATTCTTCGCCTACGCAATCCGCCATCACCAAGGATCTCGGACTAACGGTCTCGGAG
gattgat putative branch site (score: 4)
ttttcttgtatcttc CT-rich tract
tttgtatat TA-rich tract