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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtggtagatagtagatacagtatgtgtttagtacagccatgatcctgaatttggtttgatgcctgaagacgcaaaccattgtatttttagGCAAATGGTTGTCATTTTACATATGGATTTGGATCTGATCGATGATTTTGCTGACCATTCACATCCAAATGACCCACTTTCAATTTTTGTTGGCACTACA

Basic information

species Vitis vinifera
transcript Vv17s0000g00700.t01
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gccatgatcctgaatttggtttgatgcctgaagacgcaaaccattgtatttttagGCAAATGGTTGTCATTTTACATATGGATTTGGATCTGATCGATGATTTTGCTGACCATTCACATCCAAATGACCCACTTTCAATTTTTGTTGGCACTACA
                  gtttgat  putative branch site (score: 5)
                                              tattttt  putative PPT
                                          attgtattttta  TA-rich tract